Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trim8Q99PJ2 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Trim8Q99PJ2 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trim8Q99PJ2 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim8Q99PJ2 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.83■□□□□ 0.28
Trim8Q99PJ2 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.83■□□□□ 0.28
Trim8Q99PJ2 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.83■□□□□ 0.28
Trim8Q99PJ2 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.83■□□□□ 0.28
Trim8Q99PJ2 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.83■□□□□ 0.28
Trim8Q99PJ2 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim8Q99PJ2 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim8Q99PJ2 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim8Q99PJ2 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim8Q99PJ2 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim8Q99PJ2 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim8Q99PJ2 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.83■□□□□ 0.28
Trim8Q99PJ2 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim8Q99PJ2 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim8Q99PJ2 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim8Q99PJ2 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim8Q99PJ2 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim8Q99PJ2 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim8Q99PJ2 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim8Q99PJ2 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim8Q99PJ2 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim8Q99PJ2 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim8Q99PJ2 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trim8Q99PJ2 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim8Q99PJ2 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Trim8Q99PJ2 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim8Q99PJ2 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.82■□□□□ 0.28
Trim8Q99PJ2 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim8Q99PJ2 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim8Q99PJ2 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim8Q99PJ2 Gm10602-201ENSMUST00000098239 609 ntBASIC16.82■□□□□ 0.28
Trim8Q99PJ2 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim8Q99PJ2 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim8Q99PJ2 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trim8Q99PJ2 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim8Q99PJ2 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trim8Q99PJ2 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim8Q99PJ2 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.82■□□□□ 0.28
Trim8Q99PJ2 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.82■□□□□ 0.28
Trim8Q99PJ2 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim8Q99PJ2 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim8Q99PJ2 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim8Q99PJ2 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim8Q99PJ2 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim8Q99PJ2 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim8Q99PJ2 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim8Q99PJ2 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim8Q99PJ2 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim8Q99PJ2 Haglr-201ENSMUST00000100000 2085 ntBASIC16.81■□□□□ 0.28
Trim8Q99PJ2 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim8Q99PJ2 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.81■□□□□ 0.28
Trim8Q99PJ2 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Trim8Q99PJ2 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim8Q99PJ2 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.81■□□□□ 0.28
Trim8Q99PJ2 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim8Q99PJ2 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim8Q99PJ2 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim8Q99PJ2 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim8Q99PJ2 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim8Q99PJ2 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim8Q99PJ2 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.81■□□□□ 0.28
Trim8Q99PJ2 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim8Q99PJ2 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim8Q99PJ2 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Trim8Q99PJ2 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim8Q99PJ2 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim8Q99PJ2 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Trim8Q99PJ2 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim8Q99PJ2 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Trim8Q99PJ2 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.8■□□□□ 0.28
Trim8Q99PJ2 Gm26524-201ENSMUST00000192339 390 ntBASIC16.8■□□□□ 0.28
Trim8Q99PJ2 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Trim8Q99PJ2 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim8Q99PJ2 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trim8Q99PJ2 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.8■□□□□ 0.28
Trim8Q99PJ2 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.8■□□□□ 0.28
Trim8Q99PJ2 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Trim8Q99PJ2 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Trim8Q99PJ2 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim8Q99PJ2 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
Trim8Q99PJ2 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim8Q99PJ2 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.79■□□□□ 0.28
Trim8Q99PJ2 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim8Q99PJ2 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim8Q99PJ2 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim8Q99PJ2 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim8Q99PJ2 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Trim8Q99PJ2 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim8Q99PJ2 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
Trim8Q99PJ2 Gm7290-201ENSMUST00000104990 617 ntBASIC16.79■□□□□ 0.28
Trim8Q99PJ2 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.79■□□□□ 0.28
Trim8Q99PJ2 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.79■□□□□ 0.28
Trim8Q99PJ2 Gm12918-201ENSMUST00000120234 636 ntBASIC16.79■□□□□ 0.28
Trim8Q99PJ2 Gm15710-201ENSMUST00000121821 636 ntBASIC16.79■□□□□ 0.28
Trim8Q99PJ2 Gm5075-201ENSMUST00000196916 622 ntBASIC16.79■□□□□ 0.28
Trim8Q99PJ2 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms