Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdh15Q99PJ1 Gm25911-201ENSMUST00000157621 56 ntBASIC19.5■□□□□ 0.71
Pcdh15Q99PJ1 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC19.5■□□□□ 0.71
Pcdh15Q99PJ1 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdh15Q99PJ1 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Pcdh15Q99PJ1 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdh15Q99PJ1 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdh15Q99PJ1 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.5■□□□□ 0.71
Pcdh15Q99PJ1 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdh15Q99PJ1 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdh15Q99PJ1 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdh15Q99PJ1 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdh15Q99PJ1 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdh15Q99PJ1 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdh15Q99PJ1 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Pcdh15Q99PJ1 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC19.49■□□□□ 0.71
Pcdh15Q99PJ1 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdh15Q99PJ1 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdh15Q99PJ1 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdh15Q99PJ1 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdh15Q99PJ1 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdh15Q99PJ1 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdh15Q99PJ1 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
Pcdh15Q99PJ1 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC19.49■□□□□ 0.71
Pcdh15Q99PJ1 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC19.49■□□□□ 0.71
Pcdh15Q99PJ1 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.49■□□□□ 0.71
Pcdh15Q99PJ1 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdh15Q99PJ1 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Pcdh15Q99PJ1 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdh15Q99PJ1 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdh15Q99PJ1 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
Pcdh15Q99PJ1 Gm13312-201ENSMUST00000119631 718 ntBASIC19.48■□□□□ 0.71
Pcdh15Q99PJ1 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Pcdh15Q99PJ1 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC19.48■□□□□ 0.71
Pcdh15Q99PJ1 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdh15Q99PJ1 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Pcdh15Q99PJ1 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdh15Q99PJ1 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdh15Q99PJ1 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdh15Q99PJ1 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Pcdh15Q99PJ1 Gm2756-201ENSMUST00000195851 400 ntBASIC19.47■□□□□ 0.71
Pcdh15Q99PJ1 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdh15Q99PJ1 Gm10175-201ENSMUST00000086013 645 ntBASIC19.47■□□□□ 0.71
Pcdh15Q99PJ1 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Pcdh15Q99PJ1 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdh15Q99PJ1 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Pcdh15Q99PJ1 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Pcdh15Q99PJ1 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdh15Q99PJ1 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdh15Q99PJ1 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdh15Q99PJ1 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdh15Q99PJ1 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.47■□□□□ 0.71
Pcdh15Q99PJ1 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdh15Q99PJ1 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.46■□□□□ 0.71
Pcdh15Q99PJ1 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdh15Q99PJ1 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdh15Q99PJ1 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdh15Q99PJ1 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdh15Q99PJ1 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdh15Q99PJ1 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdh15Q99PJ1 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdh15Q99PJ1 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdh15Q99PJ1 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdh15Q99PJ1 Gm7506-201ENSMUST00000207758 815 ntBASIC19.46■□□□□ 0.71
Pcdh15Q99PJ1 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdh15Q99PJ1 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdh15Q99PJ1 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdh15Q99PJ1 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdh15Q99PJ1 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
Pcdh15Q99PJ1 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.7
Pcdh15Q99PJ1 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdh15Q99PJ1 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC19.45■□□□□ 0.7
Pcdh15Q99PJ1 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC19.45■□□□□ 0.7
Pcdh15Q99PJ1 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdh15Q99PJ1 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdh15Q99PJ1 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdh15Q99PJ1 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdh15Q99PJ1 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdh15Q99PJ1 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdh15Q99PJ1 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdh15Q99PJ1 Gm14140-201ENSMUST00000119999 995 ntBASIC19.45■□□□□ 0.7
Pcdh15Q99PJ1 Gm44430-201ENSMUST00000203376 995 ntBASIC19.45■□□□□ 0.7
Pcdh15Q99PJ1 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC19.44■□□□□ 0.7
Pcdh15Q99PJ1 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdh15Q99PJ1 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC19.44■□□□□ 0.7
Pcdh15Q99PJ1 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC19.44■□□□□ 0.7
Pcdh15Q99PJ1 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC19.44■□□□□ 0.7
Pcdh15Q99PJ1 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdh15Q99PJ1 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdh15Q99PJ1 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC19.44■□□□□ 0.7
Pcdh15Q99PJ1 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdh15Q99PJ1 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdh15Q99PJ1 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdh15Q99PJ1 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Pcdh15Q99PJ1 Gm43935-201ENSMUST00000203569 1050 ntBASIC19.43■□□□□ 0.7
Pcdh15Q99PJ1 CT943659.1-201ENSMUST00000215459 326 ntBASIC19.43■□□□□ 0.7
Pcdh15Q99PJ1 Rbfox2-207ENSMUST00000227533 1041 ntBASIC19.43■□□□□ 0.7
Pcdh15Q99PJ1 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdh15Q99PJ1 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdh15Q99PJ1 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms