Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.03■□□□□ 0.16
Nkx6-1Q99MA9 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.03■□□□□ 0.16
Nkx6-1Q99MA9 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nkx6-1Q99MA9 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nkx6-1Q99MA9 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Nkx6-1Q99MA9 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nkx6-1Q99MA9 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.03■□□□□ 0.16
Nkx6-1Q99MA9 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nkx6-1Q99MA9 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nkx6-1Q99MA9 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nkx6-1Q99MA9 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nkx6-1Q99MA9 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Nkx6-1Q99MA9 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.03■□□□□ 0.16
Nkx6-1Q99MA9 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.03■□□□□ 0.16
Nkx6-1Q99MA9 Gm27525-201ENSMUST00000184465 107 ntBASIC16.03■□□□□ 0.16
Nkx6-1Q99MA9 Gm37935-201ENSMUST00000192012 982 ntBASIC16.03■□□□□ 0.16
Nkx6-1Q99MA9 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nkx6-1Q99MA9 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nkx6-1Q99MA9 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nkx6-1Q99MA9 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Nkx6-1Q99MA9 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nkx6-1Q99MA9 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nkx6-1Q99MA9 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC16.02■□□□□ 0.16
Nkx6-1Q99MA9 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Nkx6-1Q99MA9 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Nkx6-1Q99MA9 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nkx6-1Q99MA9 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
Nkx6-1Q99MA9 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Nkx6-1Q99MA9 AC132104.2-201ENSMUST00000215011 266 ntBASIC16.02■□□□□ 0.16
Nkx6-1Q99MA9 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.02■□□□□ 0.16
Nkx6-1Q99MA9 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.02■□□□□ 0.16
Nkx6-1Q99MA9 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Nkx6-1Q99MA9 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Nkx6-1Q99MA9 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
Nkx6-1Q99MA9 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Nkx6-1Q99MA9 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.02■□□□□ 0.15
Nkx6-1Q99MA9 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Nkx6-1Q99MA9 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.02■□□□□ 0.15
Nkx6-1Q99MA9 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Nkx6-1Q99MA9 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Nkx6-1Q99MA9 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Nkx6-1Q99MA9 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Nkx6-1Q99MA9 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Nkx6-1Q99MA9 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nkx6-1Q99MA9 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nkx6-1Q99MA9 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nkx6-1Q99MA9 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Nkx6-1Q99MA9 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Nkx6-1Q99MA9 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Nkx6-1Q99MA9 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.01■□□□□ 0.15
Nkx6-1Q99MA9 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nkx6-1Q99MA9 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nkx6-1Q99MA9 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nkx6-1Q99MA9 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Nkx6-1Q99MA9 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.01■□□□□ 0.15
Nkx6-1Q99MA9 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.01■□□□□ 0.15
Nkx6-1Q99MA9 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.01■□□□□ 0.15
Nkx6-1Q99MA9 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.01■□□□□ 0.15
Nkx6-1Q99MA9 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nkx6-1Q99MA9 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC16.01■□□□□ 0.15
Nkx6-1Q99MA9 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.01■□□□□ 0.15
Nkx6-1Q99MA9 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nkx6-1Q99MA9 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Nkx6-1Q99MA9 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Nkx6-1Q99MA9 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nkx6-1Q99MA9 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nkx6-1Q99MA9 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nkx6-1Q99MA9 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx6-1Q99MA9 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx6-1Q99MA9 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16■□□□□ 0.15
Nkx6-1Q99MA9 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx6-1Q99MA9 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx6-1Q99MA9 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx6-1Q99MA9 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx6-1Q99MA9 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16■□□□□ 0.15
Nkx6-1Q99MA9 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16■□□□□ 0.15
Nkx6-1Q99MA9 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx6-1Q99MA9 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC16■□□□□ 0.15
Nkx6-1Q99MA9 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16■□□□□ 0.15
Nkx6-1Q99MA9 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
Nkx6-1Q99MA9 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16■□□□□ 0.15
Nkx6-1Q99MA9 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx6-1Q99MA9 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx6-1Q99MA9 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx6-1Q99MA9 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16■□□□□ 0.15
Nkx6-1Q99MA9 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16■□□□□ 0.15
Nkx6-1Q99MA9 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.99■□□□□ 0.15
Nkx6-1Q99MA9 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx6-1Q99MA9 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Nkx6-1Q99MA9 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx6-1Q99MA9 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Nkx6-1Q99MA9 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
Nkx6-1Q99MA9 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx6-1Q99MA9 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx6-1Q99MA9 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx6-1Q99MA9 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.99■□□□□ 0.15
Nkx6-1Q99MA9 Gm5712-201ENSMUST00000199748 1043 ntBASIC15.99■□□□□ 0.15
Nkx6-1Q99MA9 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx6-1Q99MA9 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx6-1Q99MA9 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms