Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm7153-201ENSMUST00000117092 455 ntBASIC15.03■□□□□ -0
Scrt1Q99M85 Gm16061-201ENSMUST00000122167 857 ntBASIC15.03■□□□□ -0
Scrt1Q99M85 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC15.03■□□□□ -0
Scrt1Q99M85 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC15.03■□□□□ -0
Scrt1Q99M85 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Scrt1Q99M85 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Scrt1Q99M85 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Scrt1Q99M85 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Scrt1Q99M85 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Scrt1Q99M85 Zcchc6-207ENSMUST00000225576 2499 ntBASIC15.03■□□□□ -0
Scrt1Q99M85 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Scrt1Q99M85 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.03■□□□□ -0
Scrt1Q99M85 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.02■□□□□ -0
Scrt1Q99M85 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Scrt1Q99M85 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Scrt1Q99M85 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Scrt1Q99M85 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Scrt1Q99M85 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Scrt1Q99M85 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Scrt1Q99M85 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Scrt1Q99M85 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.02■□□□□ -0
Scrt1Q99M85 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Scrt1Q99M85 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC15.02■□□□□ -0
Scrt1Q99M85 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Scrt1Q99M85 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC15.02■□□□□ -0
Scrt1Q99M85 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.02■□□□□ -0
Scrt1Q99M85 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.02■□□□□ -0
Scrt1Q99M85 Gm7791-201ENSMUST00000219066 539 ntBASIC15.02■□□□□ -0
Scrt1Q99M85 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Scrt1Q99M85 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Scrt1Q99M85 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Scrt1Q99M85 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scrt1Q99M85 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scrt1Q99M85 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Scrt1Q99M85 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.02□□□□□ -0.01
Scrt1Q99M85 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Scrt1Q99M85 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scrt1Q99M85 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scrt1Q99M85 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scrt1Q99M85 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scrt1Q99M85 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Scrt1Q99M85 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scrt1Q99M85 Gm17808-201ENSMUST00000200859 894 ntBASIC15.01□□□□□ -0.01
Scrt1Q99M85 Gm7370-201ENSMUST00000219471 767 ntBASIC15.01□□□□□ -0.01
Scrt1Q99M85 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scrt1Q99M85 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scrt1Q99M85 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC15.01□□□□□ -0.01
Scrt1Q99M85 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scrt1Q99M85 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scrt1Q99M85 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scrt1Q99M85 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scrt1Q99M85 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scrt1Q99M85 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Scrt1Q99M85 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Scrt1Q99M85 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scrt1Q99M85 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Scrt1Q99M85 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Scrt1Q99M85 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC15□□□□□ -0.01
Scrt1Q99M85 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Scrt1Q99M85 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Scrt1Q99M85 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Scrt1Q99M85 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC15□□□□□ -0.01
Scrt1Q99M85 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15□□□□□ -0.01
Scrt1Q99M85 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15□□□□□ -0.01
Scrt1Q99M85 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15□□□□□ -0.01
Scrt1Q99M85 Gm27389-201ENSMUST00000183622 195 ntBASIC15□□□□□ -0.01
Scrt1Q99M85 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15□□□□□ -0.01
Scrt1Q99M85 Gm4974-201ENSMUST00000209974 875 ntBASIC15□□□□□ -0.01
Scrt1Q99M85 Gm18669-201ENSMUST00000216049 778 ntBASIC15□□□□□ -0.01
Scrt1Q99M85 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC15□□□□□ -0.01
Scrt1Q99M85 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15□□□□□ -0.01
Scrt1Q99M85 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Scrt1Q99M85 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Scrt1Q99M85 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Scrt1Q99M85 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Scrt1Q99M85 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scrt1Q99M85 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scrt1Q99M85 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scrt1Q99M85 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Scrt1Q99M85 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Scrt1Q99M85 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Scrt1Q99M85 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scrt1Q99M85 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scrt1Q99M85 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.99□□□□□ -0.01
Scrt1Q99M85 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC14.99□□□□□ -0.01
Scrt1Q99M85 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scrt1Q99M85 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scrt1Q99M85 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scrt1Q99M85 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scrt1Q99M85 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Scrt1Q99M85 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scrt1Q99M85 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scrt1Q99M85 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scrt1Q99M85 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scrt1Q99M85 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scrt1Q99M85 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scrt1Q99M85 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Scrt1Q99M85 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scrt1Q99M85 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Scrt1Q99M85 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms