Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RtcbQ99LF4 Gm43231-201ENSMUST00000202960 2258 ntBASIC21.17■□□□□ 0.98
RtcbQ99LF4 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
RtcbQ99LF4 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC21.17■□□□□ 0.98
RtcbQ99LF4 AC161829.1-201ENSMUST00000220298 281 ntBASIC21.17■□□□□ 0.98
RtcbQ99LF4 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RtcbQ99LF4 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RtcbQ99LF4 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RtcbQ99LF4 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RtcbQ99LF4 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RtcbQ99LF4 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
RtcbQ99LF4 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
RtcbQ99LF4 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC21.16■□□□□ 0.98
RtcbQ99LF4 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RtcbQ99LF4 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RtcbQ99LF4 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RtcbQ99LF4 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RtcbQ99LF4 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
RtcbQ99LF4 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC21.16■□□□□ 0.98
RtcbQ99LF4 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
RtcbQ99LF4 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
RtcbQ99LF4 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RtcbQ99LF4 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC21.16■□□□□ 0.98
RtcbQ99LF4 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RtcbQ99LF4 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RtcbQ99LF4 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RtcbQ99LF4 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RtcbQ99LF4 Gm45141-201ENSMUST00000206502 1888 ntBASIC21.15■□□□□ 0.98
RtcbQ99LF4 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC21.15■□□□□ 0.98
RtcbQ99LF4 Gm35558-201ENSMUST00000222675 2219 ntBASIC21.15■□□□□ 0.98
RtcbQ99LF4 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC21.15■□□□□ 0.98
RtcbQ99LF4 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RtcbQ99LF4 Gm1818-201ENSMUST00000169406 1184 ntBASIC21.15■□□□□ 0.98
RtcbQ99LF4 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
RtcbQ99LF4 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RtcbQ99LF4 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC21.15■□□□□ 0.98
RtcbQ99LF4 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC21.15■□□□□ 0.98
RtcbQ99LF4 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC21.15■□□□□ 0.98
RtcbQ99LF4 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RtcbQ99LF4 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
RtcbQ99LF4 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC21.15■□□□□ 0.98
RtcbQ99LF4 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RtcbQ99LF4 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RtcbQ99LF4 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RtcbQ99LF4 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RtcbQ99LF4 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RtcbQ99LF4 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RtcbQ99LF4 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
RtcbQ99LF4 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
RtcbQ99LF4 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
RtcbQ99LF4 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RtcbQ99LF4 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RtcbQ99LF4 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC21.14■□□□□ 0.97
RtcbQ99LF4 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RtcbQ99LF4 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC21.14■□□□□ 0.97
RtcbQ99LF4 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC21.14■□□□□ 0.97
RtcbQ99LF4 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RtcbQ99LF4 Gm43073-201ENSMUST00000198200 1189 ntBASIC21.14■□□□□ 0.97
RtcbQ99LF4 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RtcbQ99LF4 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RtcbQ99LF4 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
RtcbQ99LF4 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RtcbQ99LF4 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RtcbQ99LF4 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RtcbQ99LF4 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RtcbQ99LF4 Gm6627-201ENSMUST00000218299 2386 ntBASIC21.14■□□□□ 0.97
RtcbQ99LF4 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RtcbQ99LF4 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RtcbQ99LF4 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RtcbQ99LF4 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RtcbQ99LF4 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC21.13■□□□□ 0.97
RtcbQ99LF4 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
RtcbQ99LF4 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RtcbQ99LF4 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RtcbQ99LF4 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RtcbQ99LF4 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
RtcbQ99LF4 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
RtcbQ99LF4 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RtcbQ99LF4 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RtcbQ99LF4 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC21.12■□□□□ 0.97
RtcbQ99LF4 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RtcbQ99LF4 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RtcbQ99LF4 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
RtcbQ99LF4 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
RtcbQ99LF4 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RtcbQ99LF4 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RtcbQ99LF4 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RtcbQ99LF4 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC21.12■□□□□ 0.97
RtcbQ99LF4 AC153794.1-201ENSMUST00000169148 126 ntBASIC21.12■□□□□ 0.97
RtcbQ99LF4 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC21.12■□□□□ 0.97
RtcbQ99LF4 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RtcbQ99LF4 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RtcbQ99LF4 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RtcbQ99LF4 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RtcbQ99LF4 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC21.12■□□□□ 0.97
RtcbQ99LF4 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
RtcbQ99LF4 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RtcbQ99LF4 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC21.12■□□□□ 0.97
RtcbQ99LF4 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RtcbQ99LF4 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms