Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Usp11Q99K46 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp11Q99K46 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.07■□□□□ 0.48
Usp11Q99K46 Gm15378-201ENSMUST00000121894 207 ntBASIC18.07■□□□□ 0.48
Usp11Q99K46 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Usp11Q99K46 Mir2861-201ENSMUST00000175539 82 ntBASIC18.07■□□□□ 0.48
Usp11Q99K46 Gm10698-201ENSMUST00000182663 604 ntBASIC18.07■□□□□ 0.48
Usp11Q99K46 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.07■□□□□ 0.48
Usp11Q99K46 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
Usp11Q99K46 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Usp11Q99K46 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.07■□□□□ 0.48
Usp11Q99K46 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Usp11Q99K46 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.06■□□□□ 0.48
Usp11Q99K46 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC18.06■□□□□ 0.48
Usp11Q99K46 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC18.06■□□□□ 0.48
Usp11Q99K46 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Usp11Q99K46 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Usp11Q99K46 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.06■□□□□ 0.48
Usp11Q99K46 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Usp11Q99K46 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp11Q99K46 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp11Q99K46 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Usp11Q99K46 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Usp11Q99K46 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp11Q99K46 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.06■□□□□ 0.48
Usp11Q99K46 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Usp11Q99K46 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp11Q99K46 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp11Q99K46 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.06■□□□□ 0.48
Usp11Q99K46 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Usp11Q99K46 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Usp11Q99K46 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Usp11Q99K46 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp11Q99K46 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Usp11Q99K46 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Usp11Q99K46 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp11Q99K46 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Usp11Q99K46 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.05■□□□□ 0.48
Usp11Q99K46 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp11Q99K46 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp11Q99K46 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp11Q99K46 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp11Q99K46 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp11Q99K46 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.05■□□□□ 0.48
Usp11Q99K46 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp11Q99K46 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.04■□□□□ 0.48
Usp11Q99K46 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp11Q99K46 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp11Q99K46 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Usp11Q99K46 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Usp11Q99K46 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.04■□□□□ 0.48
Usp11Q99K46 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp11Q99K46 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Usp11Q99K46 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Usp11Q99K46 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Usp11Q99K46 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.04■□□□□ 0.48
Usp11Q99K46 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Usp11Q99K46 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.04■□□□□ 0.48
Usp11Q99K46 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.04■□□□□ 0.48
Usp11Q99K46 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.04■□□□□ 0.48
Usp11Q99K46 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.04■□□□□ 0.48
Usp11Q99K46 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp11Q99K46 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp11Q99K46 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp11Q99K46 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp11Q99K46 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.04■□□□□ 0.48
Usp11Q99K46 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp11Q99K46 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp11Q99K46 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Usp11Q99K46 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Usp11Q99K46 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Usp11Q99K46 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp11Q99K46 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Usp11Q99K46 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp11Q99K46 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.03■□□□□ 0.48
Usp11Q99K46 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp11Q99K46 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Usp11Q99K46 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.03■□□□□ 0.48
Usp11Q99K46 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.03■□□□□ 0.48
Usp11Q99K46 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.03■□□□□ 0.48
Usp11Q99K46 Gm18025-201ENSMUST00000221733 862 ntBASIC18.03■□□□□ 0.48
Usp11Q99K46 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Usp11Q99K46 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Usp11Q99K46 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Usp11Q99K46 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp11Q99K46 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp11Q99K46 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp11Q99K46 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.03■□□□□ 0.48
Usp11Q99K46 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp11Q99K46 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Usp11Q99K46 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Usp11Q99K46 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Usp11Q99K46 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Usp11Q99K46 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.02■□□□□ 0.48
Usp11Q99K46 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Usp11Q99K46 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Usp11Q99K46 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Usp11Q99K46 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Usp11Q99K46 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Usp11Q99K46 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms