Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Thumpd1Q99J36 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Thumpd1Q99J36 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC15.31■□□□□ 0.04
Thumpd1Q99J36 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Thumpd1Q99J36 Gm29241-201ENSMUST00000189260 1096 ntBASIC15.31■□□□□ 0.04
Thumpd1Q99J36 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC15.31■□□□□ 0.04
Thumpd1Q99J36 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Thumpd1Q99J36 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Thumpd1Q99J36 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Thumpd1Q99J36 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Thumpd1Q99J36 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Thumpd1Q99J36 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Thumpd1Q99J36 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Thumpd1Q99J36 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Thumpd1Q99J36 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Thumpd1Q99J36 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Thumpd1Q99J36 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Thumpd1Q99J36 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Thumpd1Q99J36 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Thumpd1Q99J36 Gm7290-201ENSMUST00000104990 617 ntBASIC15.3■□□□□ 0.04
Thumpd1Q99J36 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Thumpd1Q99J36 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Thumpd1Q99J36 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Thumpd1Q99J36 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Thumpd1Q99J36 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Thumpd1Q99J36 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Thumpd1Q99J36 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Thumpd1Q99J36 Gm12918-201ENSMUST00000120234 636 ntBASIC15.3■□□□□ 0.04
Thumpd1Q99J36 Gm15710-201ENSMUST00000121821 636 ntBASIC15.3■□□□□ 0.04
Thumpd1Q99J36 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Thumpd1Q99J36 Gm5075-201ENSMUST00000196916 622 ntBASIC15.3■□□□□ 0.04
Thumpd1Q99J36 Gm7291-201ENSMUST00000199147 382 ntBASIC15.3■□□□□ 0.04
Thumpd1Q99J36 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC15.3■□□□□ 0.04
Thumpd1Q99J36 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Thumpd1Q99J36 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Thumpd1Q99J36 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Thumpd1Q99J36 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Thumpd1Q99J36 Gm6365-201ENSMUST00000054711 744 ntBASIC15.3■□□□□ 0.04
Thumpd1Q99J36 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Thumpd1Q99J36 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Thumpd1Q99J36 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC15.3■□□□□ 0.04
Thumpd1Q99J36 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC15.3■□□□□ 0.04
Thumpd1Q99J36 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Thumpd1Q99J36 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Thumpd1Q99J36 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Thumpd1Q99J36 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Thumpd1Q99J36 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Thumpd1Q99J36 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Thumpd1Q99J36 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Thumpd1Q99J36 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Thumpd1Q99J36 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.29■□□□□ 0.04
Thumpd1Q99J36 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.29■□□□□ 0.04
Thumpd1Q99J36 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Thumpd1Q99J36 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Thumpd1Q99J36 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Thumpd1Q99J36 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Thumpd1Q99J36 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Thumpd1Q99J36 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.29■□□□□ 0.04
Thumpd1Q99J36 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Thumpd1Q99J36 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC15.29■□□□□ 0.04
Thumpd1Q99J36 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC15.29■□□□□ 0.04
Thumpd1Q99J36 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC15.29■□□□□ 0.04
Thumpd1Q99J36 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Thumpd1Q99J36 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Thumpd1Q99J36 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Thumpd1Q99J36 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Thumpd1Q99J36 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Thumpd1Q99J36 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Thumpd1Q99J36 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Thumpd1Q99J36 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.29■□□□□ 0.04
Thumpd1Q99J36 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd1Q99J36 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd1Q99J36 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd1Q99J36 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd1Q99J36 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd1Q99J36 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd1Q99J36 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd1Q99J36 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd1Q99J36 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Thumpd1Q99J36 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd1Q99J36 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC15.28■□□□□ 0.04
Thumpd1Q99J36 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
Thumpd1Q99J36 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd1Q99J36 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd1Q99J36 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd1Q99J36 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd1Q99J36 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd1Q99J36 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd1Q99J36 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd1Q99J36 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.28■□□□□ 0.04
Thumpd1Q99J36 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd1Q99J36 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd1Q99J36 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd1Q99J36 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd1Q99J36 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd1Q99J36 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd1Q99J36 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd1Q99J36 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd1Q99J36 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Thumpd1Q99J36 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms