Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdha8Q91Y12 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
Pcdha8Q91Y12 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdha8Q91Y12 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdha8Q91Y12 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdha8Q91Y12 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Pcdha8Q91Y12 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Pcdha8Q91Y12 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Pcdha8Q91Y12 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdha8Q91Y12 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdha8Q91Y12 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdha8Q91Y12 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.7■□□□□ 0.26
Pcdha8Q91Y12 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdha8Q91Y12 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdha8Q91Y12 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdha8Q91Y12 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdha8Q91Y12 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Pcdha8Q91Y12 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdha8Q91Y12 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdha8Q91Y12 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdha8Q91Y12 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdha8Q91Y12 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdha8Q91Y12 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Pcdha8Q91Y12 Gm4974-201ENSMUST00000209974 875 ntBASIC16.7■□□□□ 0.26
Pcdha8Q91Y12 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdha8Q91Y12 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdha8Q91Y12 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdha8Q91Y12 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdha8Q91Y12 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdha8Q91Y12 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdha8Q91Y12 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Pcdha8Q91Y12 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdha8Q91Y12 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdha8Q91Y12 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.69■□□□□ 0.26
Pcdha8Q91Y12 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdha8Q91Y12 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Pcdha8Q91Y12 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdha8Q91Y12 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Pcdha8Q91Y12 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdha8Q91Y12 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Pcdha8Q91Y12 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Pcdha8Q91Y12 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdha8Q91Y12 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdha8Q91Y12 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.69■□□□□ 0.26
Pcdha8Q91Y12 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdha8Q91Y12 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Pcdha8Q91Y12 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdha8Q91Y12 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Pcdha8Q91Y12 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdha8Q91Y12 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdha8Q91Y12 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdha8Q91Y12 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdha8Q91Y12 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Pcdha8Q91Y12 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.68■□□□□ 0.26
Pcdha8Q91Y12 Gm10517-202ENSMUST00000192970 758 ntBASIC16.68■□□□□ 0.26
Pcdha8Q91Y12 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.68■□□□□ 0.26
Pcdha8Q91Y12 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdha8Q91Y12 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.68■□□□□ 0.26
Pcdha8Q91Y12 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdha8Q91Y12 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdha8Q91Y12 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdha8Q91Y12 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.68■□□□□ 0.26
Pcdha8Q91Y12 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdha8Q91Y12 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdha8Q91Y12 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdha8Q91Y12 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdha8Q91Y12 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdha8Q91Y12 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdha8Q91Y12 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdha8Q91Y12 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdha8Q91Y12 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Pcdha8Q91Y12 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Pcdha8Q91Y12 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdha8Q91Y12 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.67■□□□□ 0.26
Pcdha8Q91Y12 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdha8Q91Y12 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdha8Q91Y12 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.67■□□□□ 0.26
Pcdha8Q91Y12 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdha8Q91Y12 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Pcdha8Q91Y12 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdha8Q91Y12 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdha8Q91Y12 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Pcdha8Q91Y12 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdha8Q91Y12 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Pcdha8Q91Y12 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.67■□□□□ 0.26
Pcdha8Q91Y12 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdha8Q91Y12 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdha8Q91Y12 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.66■□□□□ 0.26
Pcdha8Q91Y12 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdha8Q91Y12 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdha8Q91Y12 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
Pcdha8Q91Y12 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.66■□□□□ 0.26
Pcdha8Q91Y12 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdha8Q91Y12 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.66■□□□□ 0.26
Pcdha8Q91Y12 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdha8Q91Y12 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdha8Q91Y12 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdha8Q91Y12 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdha8Q91Y12 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdha8Q91Y12 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms