Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdha9Q91Y11 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
Pcdha9Q91Y11 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Pcdha9Q91Y11 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdha9Q91Y11 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdha9Q91Y11 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdha9Q91Y11 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.25■□□□□ 0.51
Pcdha9Q91Y11 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdha9Q91Y11 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdha9Q91Y11 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Pcdha9Q91Y11 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdha9Q91Y11 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdha9Q91Y11 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.25■□□□□ 0.51
Pcdha9Q91Y11 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.25■□□□□ 0.51
Pcdha9Q91Y11 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.25■□□□□ 0.51
Pcdha9Q91Y11 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdha9Q91Y11 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdha9Q91Y11 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdha9Q91Y11 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdha9Q91Y11 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Pcdha9Q91Y11 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdha9Q91Y11 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdha9Q91Y11 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Pcdha9Q91Y11 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdha9Q91Y11 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.24■□□□□ 0.51
Pcdha9Q91Y11 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.24■□□□□ 0.51
Pcdha9Q91Y11 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdha9Q91Y11 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdha9Q91Y11 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.24■□□□□ 0.51
Pcdha9Q91Y11 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.24■□□□□ 0.51
Pcdha9Q91Y11 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.24■□□□□ 0.51
Pcdha9Q91Y11 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdha9Q91Y11 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdha9Q91Y11 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdha9Q91Y11 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Pcdha9Q91Y11 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.24■□□□□ 0.51
Pcdha9Q91Y11 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdha9Q91Y11 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdha9Q91Y11 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdha9Q91Y11 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdha9Q91Y11 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdha9Q91Y11 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdha9Q91Y11 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdha9Q91Y11 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.23■□□□□ 0.51
Pcdha9Q91Y11 Gm11539-201ENSMUST00000119837 557 ntBASIC18.23■□□□□ 0.51
Pcdha9Q91Y11 Gm13436-201ENSMUST00000120418 567 ntBASIC18.23■□□□□ 0.51
Pcdha9Q91Y11 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Pcdha9Q91Y11 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Pcdha9Q91Y11 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdha9Q91Y11 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdha9Q91Y11 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdha9Q91Y11 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdha9Q91Y11 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdha9Q91Y11 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Pcdha9Q91Y11 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdha9Q91Y11 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.23■□□□□ 0.51
Pcdha9Q91Y11 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdha9Q91Y11 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Pcdha9Q91Y11 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdha9Q91Y11 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdha9Q91Y11 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.22■□□□□ 0.51
Pcdha9Q91Y11 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.22■□□□□ 0.51
Pcdha9Q91Y11 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdha9Q91Y11 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdha9Q91Y11 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdha9Q91Y11 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdha9Q91Y11 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdha9Q91Y11 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdha9Q91Y11 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdha9Q91Y11 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdha9Q91Y11 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdha9Q91Y11 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.21■□□□□ 0.51
Pcdha9Q91Y11 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdha9Q91Y11 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdha9Q91Y11 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdha9Q91Y11 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdha9Q91Y11 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdha9Q91Y11 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Pcdha9Q91Y11 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdha9Q91Y11 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Pcdha9Q91Y11 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdha9Q91Y11 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.21■□□□□ 0.51
Pcdha9Q91Y11 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdha9Q91Y11 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdha9Q91Y11 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdha9Q91Y11 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdha9Q91Y11 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdha9Q91Y11 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdha9Q91Y11 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdha9Q91Y11 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdha9Q91Y11 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdha9Q91Y11 Gm15565-201ENSMUST00000118890 427 ntBASIC18.2■□□□□ 0.5
Pcdha9Q91Y11 Gm13559-201ENSMUST00000120476 863 ntBASIC18.2■□□□□ 0.5
Pcdha9Q91Y11 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.2■□□□□ 0.5
Pcdha9Q91Y11 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdha9Q91Y11 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
Pcdha9Q91Y11 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Pcdha9Q91Y11 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Pcdha9Q91Y11 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.2■□□□□ 0.5
Pcdha9Q91Y11 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms