Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb1Q91Y08 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb1Q91Y08 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.83■□□□□ 0.44
Pcdhb1Q91Y08 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Pcdhb1Q91Y08 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Pcdhb1Q91Y08 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb1Q91Y08 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb1Q91Y08 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Pcdhb1Q91Y08 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb1Q91Y08 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb1Q91Y08 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Pcdhb1Q91Y08 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb1Q91Y08 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb1Q91Y08 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.82■□□□□ 0.44
Pcdhb1Q91Y08 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb1Q91Y08 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.82■□□□□ 0.44
Pcdhb1Q91Y08 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.82■□□□□ 0.44
Pcdhb1Q91Y08 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb1Q91Y08 Timm23-208ENSMUST00000226683 750 ntBASIC17.82■□□□□ 0.44
Pcdhb1Q91Y08 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb1Q91Y08 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb1Q91Y08 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb1Q91Y08 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Pcdhb1Q91Y08 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb1Q91Y08 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb1Q91Y08 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb1Q91Y08 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb1Q91Y08 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb1Q91Y08 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb1Q91Y08 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb1Q91Y08 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb1Q91Y08 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb1Q91Y08 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Pcdhb1Q91Y08 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb1Q91Y08 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Pcdhb1Q91Y08 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb1Q91Y08 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.81■□□□□ 0.44
Pcdhb1Q91Y08 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb1Q91Y08 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.81■□□□□ 0.44
Pcdhb1Q91Y08 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Pcdhb1Q91Y08 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb1Q91Y08 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.81■□□□□ 0.44
Pcdhb1Q91Y08 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb1Q91Y08 Gm9731-201ENSMUST00000209480 747 ntBASIC17.81■□□□□ 0.44
Pcdhb1Q91Y08 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb1Q91Y08 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb1Q91Y08 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb1Q91Y08 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb1Q91Y08 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.81■□□□□ 0.44
Pcdhb1Q91Y08 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb1Q91Y08 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Pcdhb1Q91Y08 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb1Q91Y08 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb1Q91Y08 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb1Q91Y08 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb1Q91Y08 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.8■□□□□ 0.44
Pcdhb1Q91Y08 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb1Q91Y08 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.8■□□□□ 0.44
Pcdhb1Q91Y08 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.8■□□□□ 0.44
Pcdhb1Q91Y08 Gm715-201ENSMUST00000117865 831 ntBASIC17.8■□□□□ 0.44
Pcdhb1Q91Y08 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb1Q91Y08 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.8■□□□□ 0.44
Pcdhb1Q91Y08 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb1Q91Y08 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb1Q91Y08 Gm10812-201ENSMUST00000099864 546 ntBASIC17.8■□□□□ 0.44
Pcdhb1Q91Y08 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb1Q91Y08 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb1Q91Y08 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb1Q91Y08 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb1Q91Y08 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb1Q91Y08 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb1Q91Y08 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.8■□□□□ 0.44
Pcdhb1Q91Y08 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb1Q91Y08 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Pcdhb1Q91Y08 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb1Q91Y08 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb1Q91Y08 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb1Q91Y08 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb1Q91Y08 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb1Q91Y08 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb1Q91Y08 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb1Q91Y08 Gm7638-201ENSMUST00000121348 967 ntBASIC17.79■□□□□ 0.44
Pcdhb1Q91Y08 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.79■□□□□ 0.44
Pcdhb1Q91Y08 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.79■□□□□ 0.44
Pcdhb1Q91Y08 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb1Q91Y08 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Pcdhb1Q91Y08 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.79■□□□□ 0.44
Pcdhb1Q91Y08 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb1Q91Y08 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb1Q91Y08 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb1Q91Y08 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb1Q91Y08 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb1Q91Y08 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb1Q91Y08 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb1Q91Y08 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.79■□□□□ 0.44
Pcdhb1Q91Y08 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb1Q91Y08 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb1Q91Y08 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Pcdhb1Q91Y08 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Pcdhb1Q91Y08 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms