Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb2Q91Y00 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.25■□□□□ 0.51
Pcdhb2Q91Y00 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb2Q91Y00 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb2Q91Y00 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.25■□□□□ 0.51
Pcdhb2Q91Y00 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
Pcdhb2Q91Y00 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb2Q91Y00 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Pcdhb2Q91Y00 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Pcdhb2Q91Y00 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Pcdhb2Q91Y00 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb2Q91Y00 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Pcdhb2Q91Y00 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Pcdhb2Q91Y00 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Pcdhb2Q91Y00 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb2Q91Y00 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Pcdhb2Q91Y00 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.25■□□□□ 0.51
Pcdhb2Q91Y00 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb2Q91Y00 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb2Q91Y00 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb2Q91Y00 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb2Q91Y00 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb2Q91Y00 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb2Q91Y00 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.24■□□□□ 0.51
Pcdhb2Q91Y00 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb2Q91Y00 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb2Q91Y00 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb2Q91Y00 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb2Q91Y00 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Pcdhb2Q91Y00 Gm13836-201ENSMUST00000121159 501 ntBASIC18.24■□□□□ 0.51
Pcdhb2Q91Y00 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.24■□□□□ 0.51
Pcdhb2Q91Y00 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb2Q91Y00 Gm2274-201ENSMUST00000184539 609 ntBASIC18.24■□□□□ 0.51
Pcdhb2Q91Y00 Gm8969-201ENSMUST00000199694 526 ntBASIC18.24■□□□□ 0.51
Pcdhb2Q91Y00 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.24■□□□□ 0.51
Pcdhb2Q91Y00 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb2Q91Y00 Gm9987-201ENSMUST00000069768 567 ntBASIC18.24■□□□□ 0.51
Pcdhb2Q91Y00 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb2Q91Y00 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Pcdhb2Q91Y00 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb2Q91Y00 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb2Q91Y00 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb2Q91Y00 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC18.24■□□□□ 0.51
Pcdhb2Q91Y00 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.24■□□□□ 0.51
Pcdhb2Q91Y00 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb2Q91Y00 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb2Q91Y00 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb2Q91Y00 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb2Q91Y00 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb2Q91Y00 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb2Q91Y00 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb2Q91Y00 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.23■□□□□ 0.51
Pcdhb2Q91Y00 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.23■□□□□ 0.51
Pcdhb2Q91Y00 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb2Q91Y00 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Pcdhb2Q91Y00 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Pcdhb2Q91Y00 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb2Q91Y00 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.23■□□□□ 0.51
Pcdhb2Q91Y00 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb2Q91Y00 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb2Q91Y00 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Pcdhb2Q91Y00 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb2Q91Y00 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.22■□□□□ 0.51
Pcdhb2Q91Y00 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb2Q91Y00 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb2Q91Y00 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Pcdhb2Q91Y00 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb2Q91Y00 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb2Q91Y00 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb2Q91Y00 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.22■□□□□ 0.51
Pcdhb2Q91Y00 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.22■□□□□ 0.51
Pcdhb2Q91Y00 Gm7889-201ENSMUST00000185591 958 ntBASIC18.22■□□□□ 0.51
Pcdhb2Q91Y00 Gm7791-201ENSMUST00000219066 539 ntBASIC18.22■□□□□ 0.51
Pcdhb2Q91Y00 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb2Q91Y00 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb2Q91Y00 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb2Q91Y00 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb2Q91Y00 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb2Q91Y00 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb2Q91Y00 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb2Q91Y00 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb2Q91Y00 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Pcdhb2Q91Y00 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb2Q91Y00 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb2Q91Y00 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb2Q91Y00 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb2Q91Y00 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb2Q91Y00 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
Pcdhb2Q91Y00 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.21■□□□□ 0.51
Pcdhb2Q91Y00 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb2Q91Y00 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.21■□□□□ 0.51
Pcdhb2Q91Y00 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.2■□□□□ 0.5
Pcdhb2Q91Y00 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.2■□□□□ 0.5
Pcdhb2Q91Y00 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb2Q91Y00 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb2Q91Y00 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb2Q91Y00 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb2Q91Y00 Gm17661-201ENSMUST00000170317 270 ntBASIC18.2■□□□□ 0.5
Pcdhb2Q91Y00 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.2■□□□□ 0.5
Pcdhb2Q91Y00 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms