Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb3Q91XZ7 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.16■□□□□ 0.34
Pcdhb3Q91XZ7 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb3Q91XZ7 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb3Q91XZ7 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb3Q91XZ7 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Pcdhb3Q91XZ7 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb3Q91XZ7 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb3Q91XZ7 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.15■□□□□ 0.34
Pcdhb3Q91XZ7 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb3Q91XZ7 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb3Q91XZ7 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC17.15■□□□□ 0.34
Pcdhb3Q91XZ7 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb3Q91XZ7 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb3Q91XZ7 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Pcdhb3Q91XZ7 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb3Q91XZ7 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb3Q91XZ7 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb3Q91XZ7 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Pcdhb3Q91XZ7 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb3Q91XZ7 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb3Q91XZ7 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.15■□□□□ 0.34
Pcdhb3Q91XZ7 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb3Q91XZ7 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb3Q91XZ7 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Pcdhb3Q91XZ7 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb3Q91XZ7 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb3Q91XZ7 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Pcdhb3Q91XZ7 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb3Q91XZ7 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb3Q91XZ7 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb3Q91XZ7 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb3Q91XZ7 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.14■□□□□ 0.33
Pcdhb3Q91XZ7 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb3Q91XZ7 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb3Q91XZ7 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb3Q91XZ7 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb3Q91XZ7 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb3Q91XZ7 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Pcdhb3Q91XZ7 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb3Q91XZ7 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb3Q91XZ7 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb3Q91XZ7 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb3Q91XZ7 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.14■□□□□ 0.33
Pcdhb3Q91XZ7 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb3Q91XZ7 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb3Q91XZ7 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb3Q91XZ7 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb3Q91XZ7 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb3Q91XZ7 Gm6211-202ENSMUST00000167849 925 ntBASIC17.13■□□□□ 0.33
Pcdhb3Q91XZ7 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.13■□□□□ 0.33
Pcdhb3Q91XZ7 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb3Q91XZ7 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.13■□□□□ 0.33
Pcdhb3Q91XZ7 AC154532.1-201ENSMUST00000227860 965 ntBASIC17.13■□□□□ 0.33
Pcdhb3Q91XZ7 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb3Q91XZ7 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb3Q91XZ7 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb3Q91XZ7 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb3Q91XZ7 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb3Q91XZ7 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb3Q91XZ7 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
Pcdhb3Q91XZ7 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.12■□□□□ 0.33
Pcdhb3Q91XZ7 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb3Q91XZ7 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb3Q91XZ7 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb3Q91XZ7 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.12■□□□□ 0.33
Pcdhb3Q91XZ7 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb3Q91XZ7 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb3Q91XZ7 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb3Q91XZ7 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb3Q91XZ7 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.12■□□□□ 0.33
Pcdhb3Q91XZ7 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb3Q91XZ7 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb3Q91XZ7 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.12■□□□□ 0.33
Pcdhb3Q91XZ7 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.12■□□□□ 0.33
Pcdhb3Q91XZ7 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb3Q91XZ7 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.12■□□□□ 0.33
Pcdhb3Q91XZ7 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb3Q91XZ7 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb3Q91XZ7 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb3Q91XZ7 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb3Q91XZ7 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb3Q91XZ7 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb3Q91XZ7 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb3Q91XZ7 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Pcdhb3Q91XZ7 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb3Q91XZ7 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb3Q91XZ7 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb3Q91XZ7 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb3Q91XZ7 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Pcdhb3Q91XZ7 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Pcdhb3Q91XZ7 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Pcdhb3Q91XZ7 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb3Q91XZ7 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb3Q91XZ7 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Pcdhb3Q91XZ7 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb3Q91XZ7 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb3Q91XZ7 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb3Q91XZ7 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb3Q91XZ7 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms