Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb6Q91XZ4 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb6Q91XZ4 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb6Q91XZ4 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb6Q91XZ4 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Pcdhb6Q91XZ4 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Pcdhb6Q91XZ4 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.62■□□□□ 0.41
Pcdhb6Q91XZ4 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb6Q91XZ4 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb6Q91XZ4 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb6Q91XZ4 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Pcdhb6Q91XZ4 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb6Q91XZ4 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.62■□□□□ 0.41
Pcdhb6Q91XZ4 Gm3375-201ENSMUST00000203929 796 ntBASIC17.62■□□□□ 0.41
Pcdhb6Q91XZ4 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.62■□□□□ 0.41
Pcdhb6Q91XZ4 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb6Q91XZ4 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.62■□□□□ 0.41
Pcdhb6Q91XZ4 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb6Q91XZ4 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb6Q91XZ4 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Pcdhb6Q91XZ4 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb6Q91XZ4 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb6Q91XZ4 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Pcdhb6Q91XZ4 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb6Q91XZ4 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb6Q91XZ4 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Pcdhb6Q91XZ4 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb6Q91XZ4 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb6Q91XZ4 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb6Q91XZ4 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb6Q91XZ4 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.61■□□□□ 0.41
Pcdhb6Q91XZ4 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb6Q91XZ4 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb6Q91XZ4 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.61■□□□□ 0.41
Pcdhb6Q91XZ4 Mir5122-201ENSMUST00000175004 89 ntBASIC17.61■□□□□ 0.41
Pcdhb6Q91XZ4 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.61■□□□□ 0.41
Pcdhb6Q91XZ4 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb6Q91XZ4 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb6Q91XZ4 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.61■□□□□ 0.41
Pcdhb6Q91XZ4 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Pcdhb6Q91XZ4 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb6Q91XZ4 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb6Q91XZ4 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb6Q91XZ4 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb6Q91XZ4 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb6Q91XZ4 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb6Q91XZ4 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb6Q91XZ4 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.6■□□□□ 0.41
Pcdhb6Q91XZ4 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.6■□□□□ 0.41
Pcdhb6Q91XZ4 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Pcdhb6Q91XZ4 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.6■□□□□ 0.41
Pcdhb6Q91XZ4 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb6Q91XZ4 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb6Q91XZ4 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb6Q91XZ4 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb6Q91XZ4 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb6Q91XZ4 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.6■□□□□ 0.41
Pcdhb6Q91XZ4 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb6Q91XZ4 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb6Q91XZ4 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Pcdhb6Q91XZ4 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Pcdhb6Q91XZ4 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb6Q91XZ4 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb6Q91XZ4 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb6Q91XZ4 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb6Q91XZ4 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb6Q91XZ4 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb6Q91XZ4 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb6Q91XZ4 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb6Q91XZ4 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.59■□□□□ 0.41
Pcdhb6Q91XZ4 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.59■□□□□ 0.41
Pcdhb6Q91XZ4 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
Pcdhb6Q91XZ4 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.59■□□□□ 0.41
Pcdhb6Q91XZ4 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.59■□□□□ 0.41
Pcdhb6Q91XZ4 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Pcdhb6Q91XZ4 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Pcdhb6Q91XZ4 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.59■□□□□ 0.41
Pcdhb6Q91XZ4 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb6Q91XZ4 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb6Q91XZ4 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb6Q91XZ4 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb6Q91XZ4 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb6Q91XZ4 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhb6Q91XZ4 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhb6Q91XZ4 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhb6Q91XZ4 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhb6Q91XZ4 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhb6Q91XZ4 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhb6Q91XZ4 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb6Q91XZ4 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb6Q91XZ4 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb6Q91XZ4 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb6Q91XZ4 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.58■□□□□ 0.4
Pcdhb6Q91XZ4 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.58■□□□□ 0.4
Pcdhb6Q91XZ4 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb6Q91XZ4 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.58■□□□□ 0.4
Pcdhb6Q91XZ4 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Pcdhb6Q91XZ4 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb6Q91XZ4 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Pcdhb6Q91XZ4 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms