Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Gm10517-202ENSMUST00000192970 758 ntBASIC16.77■□□□□ 0.28
Pcdhb8Q91XZ2 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb8Q91XZ2 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.77■□□□□ 0.28
Pcdhb8Q91XZ2 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb8Q91XZ2 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.77■□□□□ 0.27
Pcdhb8Q91XZ2 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhb8Q91XZ2 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhb8Q91XZ2 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhb8Q91XZ2 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
Pcdhb8Q91XZ2 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhb8Q91XZ2 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhb8Q91XZ2 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.77■□□□□ 0.27
Pcdhb8Q91XZ2 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhb8Q91XZ2 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhb8Q91XZ2 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb8Q91XZ2 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb8Q91XZ2 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.76■□□□□ 0.27
Pcdhb8Q91XZ2 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb8Q91XZ2 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Pcdhb8Q91XZ2 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb8Q91XZ2 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb8Q91XZ2 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.76■□□□□ 0.27
Pcdhb8Q91XZ2 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb8Q91XZ2 Gm10698-201ENSMUST00000182663 604 ntBASIC16.76■□□□□ 0.27
Pcdhb8Q91XZ2 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.76■□□□□ 0.27
Pcdhb8Q91XZ2 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Pcdhb8Q91XZ2 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Pcdhb8Q91XZ2 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb8Q91XZ2 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb8Q91XZ2 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb8Q91XZ2 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb8Q91XZ2 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Pcdhb8Q91XZ2 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
Pcdhb8Q91XZ2 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb8Q91XZ2 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Pcdhb8Q91XZ2 Gm20760-201ENSMUST00000179197 648 ntBASIC16.75■□□□□ 0.27
Pcdhb8Q91XZ2 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.75■□□□□ 0.27
Pcdhb8Q91XZ2 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb8Q91XZ2 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb8Q91XZ2 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb8Q91XZ2 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Pcdhb8Q91XZ2 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb8Q91XZ2 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb8Q91XZ2 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb8Q91XZ2 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb8Q91XZ2 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb8Q91XZ2 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb8Q91XZ2 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb8Q91XZ2 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb8Q91XZ2 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb8Q91XZ2 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb8Q91XZ2 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Pcdhb8Q91XZ2 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.74■□□□□ 0.27
Pcdhb8Q91XZ2 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb8Q91XZ2 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.74■□□□□ 0.27
Pcdhb8Q91XZ2 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb8Q91XZ2 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb8Q91XZ2 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Pcdhb8Q91XZ2 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb8Q91XZ2 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.74■□□□□ 0.27
Pcdhb8Q91XZ2 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Pcdhb8Q91XZ2 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb8Q91XZ2 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb8Q91XZ2 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb8Q91XZ2 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.73■□□□□ 0.27
Pcdhb8Q91XZ2 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb8Q91XZ2 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Pcdhb8Q91XZ2 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb8Q91XZ2 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.73■□□□□ 0.27
Pcdhb8Q91XZ2 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb8Q91XZ2 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb8Q91XZ2 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.73■□□□□ 0.27
Pcdhb8Q91XZ2 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb8Q91XZ2 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb8Q91XZ2 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb8Q91XZ2 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb8Q91XZ2 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb8Q91XZ2 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.73■□□□□ 0.27
Pcdhb8Q91XZ2 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb8Q91XZ2 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb8Q91XZ2 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Pcdhb8Q91XZ2 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Pcdhb8Q91XZ2 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Pcdhb8Q91XZ2 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb8Q91XZ2 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb8Q91XZ2 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb8Q91XZ2 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb8Q91XZ2 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb8Q91XZ2 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb8Q91XZ2 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb8Q91XZ2 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb8Q91XZ2 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb8Q91XZ2 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb8Q91XZ2 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb8Q91XZ2 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb8Q91XZ2 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb8Q91XZ2 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb8Q91XZ2 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb8Q91XZ2 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb8Q91XZ2 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms