Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.57■□□□□ 0.24
Pcdhga11Q91XY8 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.57■□□□□ 0.24
Pcdhga11Q91XY8 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhga11Q91XY8 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhga11Q91XY8 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
Pcdhga11Q91XY8 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhga11Q91XY8 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Pcdhga11Q91XY8 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhga11Q91XY8 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Pcdhga11Q91XY8 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhga11Q91XY8 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Pcdhga11Q91XY8 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhga11Q91XY8 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhga11Q91XY8 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.56■□□□□ 0.24
Pcdhga11Q91XY8 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
Pcdhga11Q91XY8 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhga11Q91XY8 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhga11Q91XY8 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.56■□□□□ 0.24
Pcdhga11Q91XY8 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Pcdhga11Q91XY8 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhga11Q91XY8 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Pcdhga11Q91XY8 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.56■□□□□ 0.24
Pcdhga11Q91XY8 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.56■□□□□ 0.24
Pcdhga11Q91XY8 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Pcdhga11Q91XY8 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhga11Q91XY8 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhga11Q91XY8 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhga11Q91XY8 Gm10812-201ENSMUST00000099864 546 ntBASIC16.56■□□□□ 0.24
Pcdhga11Q91XY8 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhga11Q91XY8 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhga11Q91XY8 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhga11Q91XY8 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhga11Q91XY8 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhga11Q91XY8 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhga11Q91XY8 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhga11Q91XY8 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Pcdhga11Q91XY8 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhga11Q91XY8 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhga11Q91XY8 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhga11Q91XY8 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhga11Q91XY8 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Pcdhga11Q91XY8 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhga11Q91XY8 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.55■□□□□ 0.24
Pcdhga11Q91XY8 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhga11Q91XY8 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.55■□□□□ 0.24
Pcdhga11Q91XY8 Gm18666-201ENSMUST00000190039 958 ntBASIC16.55■□□□□ 0.24
Pcdhga11Q91XY8 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.55■□□□□ 0.24
Pcdhga11Q91XY8 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.55■□□□□ 0.24
Pcdhga11Q91XY8 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhga11Q91XY8 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhga11Q91XY8 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhga11Q91XY8 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhga11Q91XY8 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhga11Q91XY8 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhga11Q91XY8 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhga11Q91XY8 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhga11Q91XY8 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhga11Q91XY8 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhga11Q91XY8 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhga11Q91XY8 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.54■□□□□ 0.24
Pcdhga11Q91XY8 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhga11Q91XY8 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhga11Q91XY8 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhga11Q91XY8 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhga11Q91XY8 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhga11Q91XY8 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhga11Q91XY8 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhga11Q91XY8 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhga11Q91XY8 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhga11Q91XY8 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.54■□□□□ 0.24
Pcdhga11Q91XY8 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.54■□□□□ 0.24
Pcdhga11Q91XY8 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Pcdhga11Q91XY8 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
Pcdhga11Q91XY8 Gm18025-201ENSMUST00000221733 862 ntBASIC16.54■□□□□ 0.24
Pcdhga11Q91XY8 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhga11Q91XY8 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Pcdhga11Q91XY8 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhga11Q91XY8 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhga11Q91XY8 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhga11Q91XY8 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Pcdhga11Q91XY8 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhga11Q91XY8 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhga11Q91XY8 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhga11Q91XY8 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhga11Q91XY8 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhga11Q91XY8 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhga11Q91XY8 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhga11Q91XY8 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhga11Q91XY8 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.53■□□□□ 0.24
Pcdhga11Q91XY8 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhga11Q91XY8 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhga11Q91XY8 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.53■□□□□ 0.24
Pcdhga11Q91XY8 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.53■□□□□ 0.24
Pcdhga11Q91XY8 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.53■□□□□ 0.24
Pcdhga11Q91XY8 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Pcdhga11Q91XY8 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhga11Q91XY8 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhga11Q91XY8 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhga11Q91XY8 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Pcdhga11Q91XY8 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms