Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga3Q91XY5 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga3Q91XY5 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga3Q91XY5 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga3Q91XY5 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga3Q91XY5 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC15.29■□□□□ 0.04
Pcdhga3Q91XY5 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga3Q91XY5 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga3Q91XY5 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Pcdhga3Q91XY5 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga3Q91XY5 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga3Q91XY5 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga3Q91XY5 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga3Q91XY5 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Pcdhga3Q91XY5 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga3Q91XY5 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga3Q91XY5 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga3Q91XY5 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC15.28■□□□□ 0.04
Pcdhga3Q91XY5 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Pcdhga3Q91XY5 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga3Q91XY5 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Pcdhga3Q91XY5 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga3Q91XY5 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Pcdhga3Q91XY5 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga3Q91XY5 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga3Q91XY5 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga3Q91XY5 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.28■□□□□ 0.04
Pcdhga3Q91XY5 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga3Q91XY5 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Pcdhga3Q91XY5 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC15.28■□□□□ 0.04
Pcdhga3Q91XY5 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC15.28■□□□□ 0.04
Pcdhga3Q91XY5 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga3Q91XY5 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC15.28■□□□□ 0.04
Pcdhga3Q91XY5 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC15.28■□□□□ 0.04
Pcdhga3Q91XY5 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga3Q91XY5 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.28■□□□□ 0.04
Pcdhga3Q91XY5 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga3Q91XY5 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga3Q91XY5 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga3Q91XY5 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga3Q91XY5 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC15.28■□□□□ 0.04
Pcdhga3Q91XY5 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga3Q91XY5 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga3Q91XY5 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga3Q91XY5 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhga3Q91XY5 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhga3Q91XY5 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
Pcdhga3Q91XY5 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhga3Q91XY5 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhga3Q91XY5 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhga3Q91XY5 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhga3Q91XY5 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhga3Q91XY5 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhga3Q91XY5 Gm5643-201ENSMUST00000117081 966 ntBASIC15.27■□□□□ 0.04
Pcdhga3Q91XY5 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC15.27■□□□□ 0.04
Pcdhga3Q91XY5 Gm10653-202ENSMUST00000139570 835 ntBASIC15.27■□□□□ 0.04
Pcdhga3Q91XY5 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC15.27■□□□□ 0.04
Pcdhga3Q91XY5 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhga3Q91XY5 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhga3Q91XY5 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.27■□□□□ 0.04
Pcdhga3Q91XY5 Gm18025-201ENSMUST00000221733 862 ntBASIC15.27■□□□□ 0.04
Pcdhga3Q91XY5 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Pcdhga3Q91XY5 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhga3Q91XY5 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.27■□□□□ 0.03
Pcdhga3Q91XY5 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Pcdhga3Q91XY5 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhga3Q91XY5 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhga3Q91XY5 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhga3Q91XY5 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhga3Q91XY5 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhga3Q91XY5 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhga3Q91XY5 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhga3Q91XY5 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhga3Q91XY5 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhga3Q91XY5 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Pcdhga3Q91XY5 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC15.26■□□□□ 0.03
Pcdhga3Q91XY5 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhga3Q91XY5 Mir8112-201ENSMUST00000184382 131 ntBASIC15.26■□□□□ 0.03
Pcdhga3Q91XY5 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Pcdhga3Q91XY5 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhga3Q91XY5 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhga3Q91XY5 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC15.26■□□□□ 0.03
Pcdhga3Q91XY5 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Pcdhga3Q91XY5 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhga3Q91XY5 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhga3Q91XY5 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhga3Q91XY5 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga3Q91XY5 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.25■□□□□ 0.03
Pcdhga3Q91XY5 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Pcdhga3Q91XY5 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.25■□□□□ 0.03
Pcdhga3Q91XY5 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga3Q91XY5 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga3Q91XY5 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga3Q91XY5 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC15.25■□□□□ 0.03
Pcdhga3Q91XY5 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga3Q91XY5 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC15.25■□□□□ 0.03
Pcdhga3Q91XY5 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC15.25■□□□□ 0.03
Pcdhga3Q91XY5 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga3Q91XY5 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga3Q91XY5 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms