Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhga4Q91XY4 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhga4Q91XY4 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Pcdhga4Q91XY4 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhga4Q91XY4 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
Pcdhga4Q91XY4 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.88■□□□□ 0.29
Pcdhga4Q91XY4 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhga4Q91XY4 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhga4Q91XY4 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.88■□□□□ 0.29
Pcdhga4Q91XY4 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.88■□□□□ 0.29
Pcdhga4Q91XY4 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.88■□□□□ 0.29
Pcdhga4Q91XY4 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhga4Q91XY4 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhga4Q91XY4 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhga4Q91XY4 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhga4Q91XY4 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Pcdhga4Q91XY4 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhga4Q91XY4 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhga4Q91XY4 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhga4Q91XY4 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Pcdhga4Q91XY4 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhga4Q91XY4 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.88■□□□□ 0.29
Pcdhga4Q91XY4 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Pcdhga4Q91XY4 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhga4Q91XY4 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Pcdhga4Q91XY4 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhga4Q91XY4 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhga4Q91XY4 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhga4Q91XY4 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhga4Q91XY4 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhga4Q91XY4 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhga4Q91XY4 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhga4Q91XY4 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.87■□□□□ 0.29
Pcdhga4Q91XY4 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Pcdhga4Q91XY4 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhga4Q91XY4 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Pcdhga4Q91XY4 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhga4Q91XY4 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.87■□□□□ 0.29
Pcdhga4Q91XY4 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhga4Q91XY4 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
Pcdhga4Q91XY4 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Pcdhga4Q91XY4 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.87■□□□□ 0.29
Pcdhga4Q91XY4 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhga4Q91XY4 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhga4Q91XY4 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhga4Q91XY4 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhga4Q91XY4 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhga4Q91XY4 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.86■□□□□ 0.29
Pcdhga4Q91XY4 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhga4Q91XY4 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhga4Q91XY4 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhga4Q91XY4 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhga4Q91XY4 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhga4Q91XY4 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhga4Q91XY4 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhga4Q91XY4 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhga4Q91XY4 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Pcdhga4Q91XY4 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhga4Q91XY4 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhga4Q91XY4 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
Pcdhga4Q91XY4 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhga4Q91XY4 Gm4974-201ENSMUST00000209974 875 ntBASIC16.86■□□□□ 0.29
Pcdhga4Q91XY4 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.86■□□□□ 0.29
Pcdhga4Q91XY4 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhga4Q91XY4 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Pcdhga4Q91XY4 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhga4Q91XY4 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
Pcdhga4Q91XY4 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhga4Q91XY4 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Pcdhga4Q91XY4 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhga4Q91XY4 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhga4Q91XY4 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhga4Q91XY4 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Pcdhga4Q91XY4 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhga4Q91XY4 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhga4Q91XY4 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Pcdhga4Q91XY4 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhga4Q91XY4 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhga4Q91XY4 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Pcdhga4Q91XY4 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhga4Q91XY4 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhga4Q91XY4 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.85■□□□□ 0.29
Pcdhga4Q91XY4 Gm10517-202ENSMUST00000192970 758 ntBASIC16.85■□□□□ 0.29
Pcdhga4Q91XY4 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhga4Q91XY4 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhga4Q91XY4 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhga4Q91XY4 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Pcdhga4Q91XY4 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhga4Q91XY4 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Pcdhga4Q91XY4 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Pcdhga4Q91XY4 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhga4Q91XY4 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhga4Q91XY4 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhga4Q91XY4 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.84■□□□□ 0.29
Pcdhga4Q91XY4 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhga4Q91XY4 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhga4Q91XY4 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Pcdhga4Q91XY4 Gm5417-201ENSMUST00000079706 384 ntBASIC16.84■□□□□ 0.29
Pcdhga4Q91XY4 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Pcdhga4Q91XY4 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms