Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Pcdhgb1Q91XX8 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhgb1Q91XX8 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhgb1Q91XX8 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Pcdhgb1Q91XX8 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhgb1Q91XX8 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.83■□□□□ 0.44
Pcdhgb1Q91XX8 Mir8112-201ENSMUST00000184382 131 ntBASIC17.83■□□□□ 0.44
Pcdhgb1Q91XX8 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhgb1Q91XX8 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Pcdhgb1Q91XX8 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhgb1Q91XX8 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhgb1Q91XX8 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.83■□□□□ 0.44
Pcdhgb1Q91XX8 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhgb1Q91XX8 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Pcdhgb1Q91XX8 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhgb1Q91XX8 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhgb1Q91XX8 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhgb1Q91XX8 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhgb1Q91XX8 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhgb1Q91XX8 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhgb1Q91XX8 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhgb1Q91XX8 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Pcdhgb1Q91XX8 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Pcdhgb1Q91XX8 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhgb1Q91XX8 Gm23634-201ENSMUST00000175071 91 ntBASIC17.82■□□□□ 0.44
Pcdhgb1Q91XX8 Gm22697-201ENSMUST00000175194 63 ntBASIC17.82■□□□□ 0.44
Pcdhgb1Q91XX8 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.82■□□□□ 0.44
Pcdhgb1Q91XX8 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.82■□□□□ 0.44
Pcdhgb1Q91XX8 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhgb1Q91XX8 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhgb1Q91XX8 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhgb1Q91XX8 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhgb1Q91XX8 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhgb1Q91XX8 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhgb1Q91XX8 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgb1Q91XX8 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgb1Q91XX8 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgb1Q91XX8 Gm10013-201ENSMUST00000106074 672 ntBASIC17.81■□□□□ 0.44
Pcdhgb1Q91XX8 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Pcdhgb1Q91XX8 Gm16061-201ENSMUST00000122167 857 ntBASIC17.81■□□□□ 0.44
Pcdhgb1Q91XX8 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.81■□□□□ 0.44
Pcdhgb1Q91XX8 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgb1Q91XX8 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.81■□□□□ 0.44
Pcdhgb1Q91XX8 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgb1Q91XX8 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgb1Q91XX8 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgb1Q91XX8 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgb1Q91XX8 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgb1Q91XX8 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgb1Q91XX8 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgb1Q91XX8 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Pcdhgb1Q91XX8 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgb1Q91XX8 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgb1Q91XX8 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgb1Q91XX8 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgb1Q91XX8 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgb1Q91XX8 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgb1Q91XX8 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgb1Q91XX8 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Pcdhgb1Q91XX8 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgb1Q91XX8 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgb1Q91XX8 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.8■□□□□ 0.44
Pcdhgb1Q91XX8 Il3ra-202ENSMUST00000223589 738 ntBASIC17.8■□□□□ 0.44
Pcdhgb1Q91XX8 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgb1Q91XX8 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgb1Q91XX8 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgb1Q91XX8 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgb1Q91XX8 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgb1Q91XX8 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Pcdhgb1Q91XX8 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Pcdhgb1Q91XX8 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgb1Q91XX8 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Pcdhgb1Q91XX8 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgb1Q91XX8 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgb1Q91XX8 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgb1Q91XX8 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgb1Q91XX8 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.79■□□□□ 0.44
Pcdhgb1Q91XX8 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.79■□□□□ 0.44
Pcdhgb1Q91XX8 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Pcdhgb1Q91XX8 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgb1Q91XX8 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgb1Q91XX8 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgb1Q91XX8 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Pcdhgb1Q91XX8 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Pcdhgb1Q91XX8 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.79■□□□□ 0.44
Pcdhgb1Q91XX8 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
Pcdhgb1Q91XX8 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgb1Q91XX8 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgb1Q91XX8 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgb1Q91XX8 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgb1Q91XX8 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgb1Q91XX8 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgb1Q91XX8 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.79■□□□□ 0.44
Pcdhgb1Q91XX8 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgb1Q91XX8 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgb1Q91XX8 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Pcdhgb1Q91XX8 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgb1Q91XX8 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
Pcdhgb1Q91XX8 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Pcdhgb1Q91XX8 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms