Protein–RNA interactions for Protein: Q91XX7

Pcdhgb2, Protocadherin gamma B2, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb2Q91XX7 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Pcdhgb2Q91XX7 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhgb2Q91XX7 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.14■□□□□ 0.17
Pcdhgb2Q91XX7 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhgb2Q91XX7 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhgb2Q91XX7 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhgb2Q91XX7 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhgb2Q91XX7 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhgb2Q91XX7 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhgb2Q91XX7 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhgb2Q91XX7 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhgb2Q91XX7 Gm13216-201ENSMUST00000117145 591 ntBASIC16.14■□□□□ 0.17
Pcdhgb2Q91XX7 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC16.14■□□□□ 0.17
Pcdhgb2Q91XX7 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.14■□□□□ 0.17
Pcdhgb2Q91XX7 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhgb2Q91XX7 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhgb2Q91XX7 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhgb2Q91XX7 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhgb2Q91XX7 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhgb2Q91XX7 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhgb2Q91XX7 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Pcdhgb2Q91XX7 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhgb2Q91XX7 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhgb2Q91XX7 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhgb2Q91XX7 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC16.13■□□□□ 0.17
Pcdhgb2Q91XX7 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.13■□□□□ 0.17
Pcdhgb2Q91XX7 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.13■□□□□ 0.17
Pcdhgb2Q91XX7 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.13■□□□□ 0.17
Pcdhgb2Q91XX7 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhgb2Q91XX7 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.13■□□□□ 0.17
Pcdhgb2Q91XX7 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Pcdhgb2Q91XX7 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhgb2Q91XX7 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhgb2Q91XX7 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhgb2Q91XX7 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhgb2Q91XX7 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhgb2Q91XX7 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.13■□□□□ 0.17
Pcdhgb2Q91XX7 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhgb2Q91XX7 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhgb2Q91XX7 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.13■□□□□ 0.17
Pcdhgb2Q91XX7 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhgb2Q91XX7 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhgb2Q91XX7 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhgb2Q91XX7 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.12■□□□□ 0.17
Pcdhgb2Q91XX7 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhgb2Q91XX7 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhgb2Q91XX7 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Pcdhgb2Q91XX7 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.12■□□□□ 0.17
Pcdhgb2Q91XX7 Gm13401-201ENSMUST00000117074 291 ntBASIC16.12■□□□□ 0.17
Pcdhgb2Q91XX7 Gm11643-201ENSMUST00000119578 864 ntBASIC16.12■□□□□ 0.17
Pcdhgb2Q91XX7 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
Pcdhgb2Q91XX7 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhgb2Q91XX7 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhgb2Q91XX7 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhgb2Q91XX7 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhgb2Q91XX7 Gm5874-201ENSMUST00000096101 508 ntBASIC16.12■□□□□ 0.17
Pcdhgb2Q91XX7 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhgb2Q91XX7 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhgb2Q91XX7 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhgb2Q91XX7 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhgb2Q91XX7 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Pcdhgb2Q91XX7 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhgb2Q91XX7 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhgb2Q91XX7 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgb2Q91XX7 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgb2Q91XX7 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgb2Q91XX7 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.11■□□□□ 0.17
Pcdhgb2Q91XX7 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.11■□□□□ 0.17
Pcdhgb2Q91XX7 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.11■□□□□ 0.17
Pcdhgb2Q91XX7 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgb2Q91XX7 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
Pcdhgb2Q91XX7 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgb2Q91XX7 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgb2Q91XX7 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC16.11■□□□□ 0.17
Pcdhgb2Q91XX7 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Pcdhgb2Q91XX7 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgb2Q91XX7 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgb2Q91XX7 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.11■□□□□ 0.17
Pcdhgb2Q91XX7 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgb2Q91XX7 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Pcdhgb2Q91XX7 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgb2Q91XX7 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgb2Q91XX7 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgb2Q91XX7 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgb2Q91XX7 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgb2Q91XX7 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.11■□□□□ 0.17
Pcdhgb2Q91XX7 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgb2Q91XX7 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgb2Q91XX7 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgb2Q91XX7 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhgb2Q91XX7 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.1■□□□□ 0.17
Pcdhgb2Q91XX7 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhgb2Q91XX7 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhgb2Q91XX7 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Pcdhgb2Q91XX7 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhgb2Q91XX7 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC16.1■□□□□ 0.17
Pcdhgb2Q91XX7 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.1■□□□□ 0.17
Pcdhgb2Q91XX7 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.1■□□□□ 0.17
Pcdhgb2Q91XX7 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Pcdhgb2Q91XX7 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms