Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgb4Q91XX6 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgb4Q91XX6 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.16■□□□□ 0.5
Pcdhgb4Q91XX6 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgb4Q91XX6 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgb4Q91XX6 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.16■□□□□ 0.5
Pcdhgb4Q91XX6 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgb4Q91XX6 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgb4Q91XX6 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgb4Q91XX6 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgb4Q91XX6 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgb4Q91XX6 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgb4Q91XX6 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgb4Q91XX6 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.15■□□□□ 0.5
Pcdhgb4Q91XX6 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgb4Q91XX6 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Pcdhgb4Q91XX6 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgb4Q91XX6 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgb4Q91XX6 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.15■□□□□ 0.5
Pcdhgb4Q91XX6 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgb4Q91XX6 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgb4Q91XX6 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.15■□□□□ 0.5
Pcdhgb4Q91XX6 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgb4Q91XX6 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
Pcdhgb4Q91XX6 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdhgb4Q91XX6 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Pcdhgb4Q91XX6 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhgb4Q91XX6 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhgb4Q91XX6 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhgb4Q91XX6 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhgb4Q91XX6 Gm15378-201ENSMUST00000121894 207 ntBASIC18.14■□□□□ 0.49
Pcdhgb4Q91XX6 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhgb4Q91XX6 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhgb4Q91XX6 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhgb4Q91XX6 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.14■□□□□ 0.49
Pcdhgb4Q91XX6 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhgb4Q91XX6 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhgb4Q91XX6 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Pcdhgb4Q91XX6 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgb4Q91XX6 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
Pcdhgb4Q91XX6 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
Pcdhgb4Q91XX6 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.13■□□□□ 0.49
Pcdhgb4Q91XX6 Gm18558-201ENSMUST00000186253 1214 ntBASIC18.13■□□□□ 0.49
Pcdhgb4Q91XX6 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.13■□□□□ 0.49
Pcdhgb4Q91XX6 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgb4Q91XX6 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgb4Q91XX6 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgb4Q91XX6 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgb4Q91XX6 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgb4Q91XX6 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgb4Q91XX6 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgb4Q91XX6 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgb4Q91XX6 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgb4Q91XX6 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.13■□□□□ 0.49
Pcdhgb4Q91XX6 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.13■□□□□ 0.49
Pcdhgb4Q91XX6 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgb4Q91XX6 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgb4Q91XX6 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgb4Q91XX6 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgb4Q91XX6 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgb4Q91XX6 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgb4Q91XX6 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.12■□□□□ 0.49
Pcdhgb4Q91XX6 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgb4Q91XX6 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Pcdhgb4Q91XX6 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgb4Q91XX6 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.12■□□□□ 0.49
Pcdhgb4Q91XX6 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgb4Q91XX6 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.12■□□□□ 0.49
Pcdhgb4Q91XX6 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgb4Q91XX6 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.12■□□□□ 0.49
Pcdhgb4Q91XX6 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgb4Q91XX6 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgb4Q91XX6 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgb4Q91XX6 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgb4Q91XX6 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgb4Q91XX6 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhgb4Q91XX6 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhgb4Q91XX6 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhgb4Q91XX6 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhgb4Q91XX6 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhgb4Q91XX6 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhgb4Q91XX6 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.11■□□□□ 0.49
Pcdhgb4Q91XX6 Gm24841-201ENSMUST00000158676 357 ntBASIC18.11■□□□□ 0.49
Pcdhgb4Q91XX6 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.11■□□□□ 0.49
Pcdhgb4Q91XX6 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.11■□□□□ 0.49
Pcdhgb4Q91XX6 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhgb4Q91XX6 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhgb4Q91XX6 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhgb4Q91XX6 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Pcdhgb4Q91XX6 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhgb4Q91XX6 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhgb4Q91XX6 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.1■□□□□ 0.49
Pcdhgb4Q91XX6 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhgb4Q91XX6 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhgb4Q91XX6 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhgb4Q91XX6 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.1■□□□□ 0.49
Pcdhgb4Q91XX6 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhgb4Q91XX6 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhgb4Q91XX6 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhgb4Q91XX6 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms