Protein–RNA interactions for Protein: Q91XX5

Pcdhgb5, Protocadherin gamma B5, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb5Q91XX5 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.03■□□□□ 0.32
Pcdhgb5Q91XX5 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhgb5Q91XX5 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Pcdhgb5Q91XX5 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Pcdhgb5Q91XX5 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhgb5Q91XX5 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhgb5Q91XX5 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Pcdhgb5Q91XX5 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhgb5Q91XX5 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.03■□□□□ 0.32
Pcdhgb5Q91XX5 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhgb5Q91XX5 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhgb5Q91XX5 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhgb5Q91XX5 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Pcdhgb5Q91XX5 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhgb5Q91XX5 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhgb5Q91XX5 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Pcdhgb5Q91XX5 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhgb5Q91XX5 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhgb5Q91XX5 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Pcdhgb5Q91XX5 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Pcdhgb5Q91XX5 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhgb5Q91XX5 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhgb5Q91XX5 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.02■□□□□ 0.32
Pcdhgb5Q91XX5 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhgb5Q91XX5 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.02■□□□□ 0.32
Pcdhgb5Q91XX5 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.02■□□□□ 0.32
Pcdhgb5Q91XX5 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
Pcdhgb5Q91XX5 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhgb5Q91XX5 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhgb5Q91XX5 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhgb5Q91XX5 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhgb5Q91XX5 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Pcdhgb5Q91XX5 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.01■□□□□ 0.31
Pcdhgb5Q91XX5 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgb5Q91XX5 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgb5Q91XX5 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgb5Q91XX5 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgb5Q91XX5 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgb5Q91XX5 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgb5Q91XX5 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgb5Q91XX5 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
Pcdhgb5Q91XX5 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgb5Q91XX5 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgb5Q91XX5 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgb5Q91XX5 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgb5Q91XX5 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Pcdhgb5Q91XX5 Gm11950-201ENSMUST00000121615 838 ntBASIC17.01■□□□□ 0.31
Pcdhgb5Q91XX5 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.01■□□□□ 0.31
Pcdhgb5Q91XX5 Gm17807-201ENSMUST00000186869 298 ntBASIC17.01■□□□□ 0.31
Pcdhgb5Q91XX5 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.01■□□□□ 0.31
Pcdhgb5Q91XX5 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhgb5Q91XX5 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhgb5Q91XX5 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
Pcdhgb5Q91XX5 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhgb5Q91XX5 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17■□□□□ 0.31
Pcdhgb5Q91XX5 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdhgb5Q91XX5 Gm6623-201ENSMUST00000173570 544 ntBASIC17■□□□□ 0.31
Pcdhgb5Q91XX5 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
Pcdhgb5Q91XX5 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhgb5Q91XX5 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhgb5Q91XX5 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhgb5Q91XX5 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhgb5Q91XX5 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17■□□□□ 0.31
Pcdhgb5Q91XX5 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhgb5Q91XX5 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhgb5Q91XX5 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdhgb5Q91XX5 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17■□□□□ 0.31
Pcdhgb5Q91XX5 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhgb5Q91XX5 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhgb5Q91XX5 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhgb5Q91XX5 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhgb5Q91XX5 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.99■□□□□ 0.31
Pcdhgb5Q91XX5 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhgb5Q91XX5 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhgb5Q91XX5 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhgb5Q91XX5 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.99■□□□□ 0.31
Pcdhgb5Q91XX5 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhgb5Q91XX5 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Pcdhgb5Q91XX5 Actl10-202ENSMUST00000226583 1501 ntBASIC16.99■□□□□ 0.31
Pcdhgb5Q91XX5 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhgb5Q91XX5 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhgb5Q91XX5 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhgb5Q91XX5 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhgb5Q91XX5 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhgb5Q91XX5 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhgb5Q91XX5 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhgb5Q91XX5 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhgb5Q91XX5 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.98■□□□□ 0.31
Pcdhgb5Q91XX5 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhgb5Q91XX5 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Pcdhgb5Q91XX5 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhgb5Q91XX5 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhgb5Q91XX5 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhgb5Q91XX5 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhgb5Q91XX5 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhgb5Q91XX5 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhgb5Q91XX5 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhgb5Q91XX5 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhgb5Q91XX5 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Pcdhgb5Q91XX5 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms