Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ddx41Q91VN6 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Ddx41Q91VN6 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ddx41Q91VN6 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ddx41Q91VN6 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ddx41Q91VN6 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ddx41Q91VN6 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ddx41Q91VN6 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Ddx41Q91VN6 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ddx41Q91VN6 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ddx41Q91VN6 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Ddx41Q91VN6 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ddx41Q91VN6 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ddx41Q91VN6 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.65■□□□□ 0.74
Ddx41Q91VN6 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Ddx41Q91VN6 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC19.65■□□□□ 0.74
Ddx41Q91VN6 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ddx41Q91VN6 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Ddx41Q91VN6 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ddx41Q91VN6 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ddx41Q91VN6 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.65■□□□□ 0.74
Ddx41Q91VN6 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ddx41Q91VN6 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Ddx41Q91VN6 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ddx41Q91VN6 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ddx41Q91VN6 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Ddx41Q91VN6 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ddx41Q91VN6 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ddx41Q91VN6 Gm10418-201ENSMUST00000100943 576 ntBASIC19.64■□□□□ 0.73
Ddx41Q91VN6 Gm13401-201ENSMUST00000117074 291 ntBASIC19.64■□□□□ 0.73
Ddx41Q91VN6 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC19.64■□□□□ 0.73
Ddx41Q91VN6 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ddx41Q91VN6 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ddx41Q91VN6 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC19.64■□□□□ 0.73
Ddx41Q91VN6 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ddx41Q91VN6 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ddx41Q91VN6 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Ddx41Q91VN6 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ddx41Q91VN6 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ddx41Q91VN6 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.64■□□□□ 0.73
Ddx41Q91VN6 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Ddx41Q91VN6 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ddx41Q91VN6 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ddx41Q91VN6 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ddx41Q91VN6 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ddx41Q91VN6 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ddx41Q91VN6 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ddx41Q91VN6 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ddx41Q91VN6 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ddx41Q91VN6 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ddx41Q91VN6 Gm6659-201ENSMUST00000174752 547 ntBASIC19.63■□□□□ 0.73
Ddx41Q91VN6 Gm18959-201ENSMUST00000208954 655 ntBASIC19.63■□□□□ 0.73
Ddx41Q91VN6 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC19.63■□□□□ 0.73
Ddx41Q91VN6 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Ddx41Q91VN6 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ddx41Q91VN6 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ddx41Q91VN6 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ddx41Q91VN6 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ddx41Q91VN6 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ddx41Q91VN6 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ddx41Q91VN6 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ddx41Q91VN6 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.62■□□□□ 0.73
Ddx41Q91VN6 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ddx41Q91VN6 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Ddx41Q91VN6 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ddx41Q91VN6 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ddx41Q91VN6 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Ddx41Q91VN6 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ddx41Q91VN6 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ddx41Q91VN6 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Ddx41Q91VN6 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ddx41Q91VN6 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ddx41Q91VN6 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ddx41Q91VN6 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Ddx41Q91VN6 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ddx41Q91VN6 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ddx41Q91VN6 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ddx41Q91VN6 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Ddx41Q91VN6 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx41Q91VN6 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx41Q91VN6 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx41Q91VN6 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.61■□□□□ 0.73
Ddx41Q91VN6 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx41Q91VN6 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx41Q91VN6 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Ddx41Q91VN6 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx41Q91VN6 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Ddx41Q91VN6 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx41Q91VN6 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Ddx41Q91VN6 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx41Q91VN6 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx41Q91VN6 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx41Q91VN6 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx41Q91VN6 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx41Q91VN6 Gm45058-201ENSMUST00000205810 766 ntBASIC19.6■□□□□ 0.73
Ddx41Q91VN6 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Ddx41Q91VN6 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx41Q91VN6 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx41Q91VN6 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx41Q91VN6 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms