Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Vsx1Q91V10 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vsx1Q91V10 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vsx1Q91V10 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vsx1Q91V10 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vsx1Q91V10 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Vsx1Q91V10 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Vsx1Q91V10 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.95■□□□□ 0.3
Vsx1Q91V10 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vsx1Q91V10 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vsx1Q91V10 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vsx1Q91V10 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Vsx1Q91V10 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Vsx1Q91V10 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vsx1Q91V10 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Vsx1Q91V10 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.95■□□□□ 0.3
Vsx1Q91V10 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC16.95■□□□□ 0.3
Vsx1Q91V10 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vsx1Q91V10 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.95■□□□□ 0.3
Vsx1Q91V10 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vsx1Q91V10 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vsx1Q91V10 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Vsx1Q91V10 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.95■□□□□ 0.3
Vsx1Q91V10 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Vsx1Q91V10 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vsx1Q91V10 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vsx1Q91V10 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vsx1Q91V10 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vsx1Q91V10 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Vsx1Q91V10 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vsx1Q91V10 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vsx1Q91V10 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Vsx1Q91V10 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vsx1Q91V10 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Vsx1Q91V10 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Vsx1Q91V10 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Vsx1Q91V10 Gm37722-201ENSMUST00000193757 208 ntBASIC16.94■□□□□ 0.3
Vsx1Q91V10 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Vsx1Q91V10 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Vsx1Q91V10 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.94■□□□□ 0.3
Vsx1Q91V10 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Vsx1Q91V10 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vsx1Q91V10 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Vsx1Q91V10 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vsx1Q91V10 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vsx1Q91V10 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vsx1Q91V10 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Vsx1Q91V10 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Vsx1Q91V10 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vsx1Q91V10 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vsx1Q91V10 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vsx1Q91V10 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Vsx1Q91V10 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vsx1Q91V10 Mir8098-201ENSMUST00000184011 137 ntBASIC16.93■□□□□ 0.3
Vsx1Q91V10 Gm27459-201ENSMUST00000184860 107 ntBASIC16.93■□□□□ 0.3
Vsx1Q91V10 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vsx1Q91V10 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Vsx1Q91V10 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vsx1Q91V10 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vsx1Q91V10 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Vsx1Q91V10 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vsx1Q91V10 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vsx1Q91V10 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Vsx1Q91V10 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vsx1Q91V10 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC16.92■□□□□ 0.3
Vsx1Q91V10 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Vsx1Q91V10 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.92■□□□□ 0.3
Vsx1Q91V10 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vsx1Q91V10 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vsx1Q91V10 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Vsx1Q91V10 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vsx1Q91V10 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Vsx1Q91V10 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vsx1Q91V10 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.92■□□□□ 0.3
Vsx1Q91V10 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vsx1Q91V10 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vsx1Q91V10 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Vsx1Q91V10 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vsx1Q91V10 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Vsx1Q91V10 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vsx1Q91V10 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Vsx1Q91V10 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.91■□□□□ 0.3
Vsx1Q91V10 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Vsx1Q91V10 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.91■□□□□ 0.3
Vsx1Q91V10 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Vsx1Q91V10 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Vsx1Q91V10 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Vsx1Q91V10 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Vsx1Q91V10 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vsx1Q91V10 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vsx1Q91V10 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vsx1Q91V10 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vsx1Q91V10 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vsx1Q91V10 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vsx1Q91V10 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Vsx1Q91V10 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Vsx1Q91V10 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vsx1Q91V10 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Vsx1Q91V10 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.91■□□□□ 0.3
Vsx1Q91V10 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms