Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
H1fooQ8VIK3 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
H1fooQ8VIK3 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
H1fooQ8VIK3 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
H1fooQ8VIK3 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
H1fooQ8VIK3 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
H1fooQ8VIK3 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC14.39□□□□□ -0.11
H1fooQ8VIK3 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
H1fooQ8VIK3 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC14.39□□□□□ -0.11
H1fooQ8VIK3 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
H1fooQ8VIK3 H2-K2-201ENSMUST00000174250 1049 ntBASIC14.39□□□□□ -0.11
H1fooQ8VIK3 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
H1fooQ8VIK3 Gm44878-201ENSMUST00000205812 1295 ntBASIC14.39□□□□□ -0.11
H1fooQ8VIK3 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
H1fooQ8VIK3 AC135637.1-201ENSMUST00000227750 365 ntBASIC14.39□□□□□ -0.11
H1fooQ8VIK3 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
H1fooQ8VIK3 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
H1fooQ8VIK3 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
H1fooQ8VIK3 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
H1fooQ8VIK3 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
H1fooQ8VIK3 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
H1fooQ8VIK3 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
H1fooQ8VIK3 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
H1fooQ8VIK3 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
H1fooQ8VIK3 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
H1fooQ8VIK3 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
H1fooQ8VIK3 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
H1fooQ8VIK3 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
H1fooQ8VIK3 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
H1fooQ8VIK3 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
H1fooQ8VIK3 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
H1fooQ8VIK3 Gm19721-201ENSMUST00000195284 1764 ntBASIC14.38□□□□□ -0.11
H1fooQ8VIK3 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
H1fooQ8VIK3 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
H1fooQ8VIK3 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
H1fooQ8VIK3 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
H1fooQ8VIK3 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC14.38□□□□□ -0.11
H1fooQ8VIK3 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC14.38□□□□□ -0.11
H1fooQ8VIK3 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
H1fooQ8VIK3 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
H1fooQ8VIK3 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
H1fooQ8VIK3 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
H1fooQ8VIK3 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
H1fooQ8VIK3 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
H1fooQ8VIK3 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
H1fooQ8VIK3 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.38□□□□□ -0.11
H1fooQ8VIK3 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
H1fooQ8VIK3 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H1fooQ8VIK3 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H1fooQ8VIK3 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.37□□□□□ -0.11
H1fooQ8VIK3 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
H1fooQ8VIK3 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
H1fooQ8VIK3 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H1fooQ8VIK3 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.37□□□□□ -0.11
H1fooQ8VIK3 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H1fooQ8VIK3 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
H1fooQ8VIK3 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
H1fooQ8VIK3 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H1fooQ8VIK3 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
H1fooQ8VIK3 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H1fooQ8VIK3 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H1fooQ8VIK3 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
H1fooQ8VIK3 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC14.37□□□□□ -0.11
H1fooQ8VIK3 Gm37292-201ENSMUST00000192062 758 ntBASIC14.37□□□□□ -0.11
H1fooQ8VIK3 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H1fooQ8VIK3 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
H1fooQ8VIK3 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H1fooQ8VIK3 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
H1fooQ8VIK3 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
H1fooQ8VIK3 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
H1fooQ8VIK3 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
H1fooQ8VIK3 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
H1fooQ8VIK3 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.37□□□□□ -0.11
H1fooQ8VIK3 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H1fooQ8VIK3 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H1fooQ8VIK3 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H1fooQ8VIK3 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
H1fooQ8VIK3 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
H1fooQ8VIK3 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.36□□□□□ -0.11
H1fooQ8VIK3 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
H1fooQ8VIK3 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
H1fooQ8VIK3 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
H1fooQ8VIK3 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
H1fooQ8VIK3 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
H1fooQ8VIK3 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
H1fooQ8VIK3 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
H1fooQ8VIK3 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC14.36□□□□□ -0.11
H1fooQ8VIK3 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC14.36□□□□□ -0.11
H1fooQ8VIK3 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC14.36□□□□□ -0.11
H1fooQ8VIK3 CT025689.6-201ENSMUST00000224991 1104 ntBASIC14.36□□□□□ -0.11
H1fooQ8VIK3 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
H1fooQ8VIK3 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
H1fooQ8VIK3 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
H1fooQ8VIK3 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
H1fooQ8VIK3 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
H1fooQ8VIK3 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
H1fooQ8VIK3 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
H1fooQ8VIK3 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
H1fooQ8VIK3 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
H1fooQ8VIK3 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms