Protein–RNA interactions for Protein: Q8VIK1

Snrnp25, U11/U12 small nuclear ribonucleoprotein 25 kDa protein, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp25Q8VIK1 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Snrnp25Q8VIK1 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Snrnp25Q8VIK1 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Snrnp25Q8VIK1 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18■□□□□ 0.47
Snrnp25Q8VIK1 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18■□□□□ 0.47
Snrnp25Q8VIK1 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Snrnp25Q8VIK1 Gm16499-203ENSMUST00000204633 2177 ntBASIC18■□□□□ 0.47
Snrnp25Q8VIK1 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Snrnp25Q8VIK1 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.99■□□□□ 0.47
Snrnp25Q8VIK1 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Snrnp25Q8VIK1 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Snrnp25Q8VIK1 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Snrnp25Q8VIK1 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Snrnp25Q8VIK1 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Snrnp25Q8VIK1 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Snrnp25Q8VIK1 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.99■□□□□ 0.47
Snrnp25Q8VIK1 Gm7889-201ENSMUST00000185591 958 ntBASIC17.99■□□□□ 0.47
Snrnp25Q8VIK1 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Snrnp25Q8VIK1 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.99■□□□□ 0.47
Snrnp25Q8VIK1 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Snrnp25Q8VIK1 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Snrnp25Q8VIK1 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.99■□□□□ 0.47
Snrnp25Q8VIK1 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Snrnp25Q8VIK1 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Snrnp25Q8VIK1 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Snrnp25Q8VIK1 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.98■□□□□ 0.47
Snrnp25Q8VIK1 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Snrnp25Q8VIK1 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Snrnp25Q8VIK1 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Snrnp25Q8VIK1 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Snrnp25Q8VIK1 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Snrnp25Q8VIK1 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Snrnp25Q8VIK1 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Snrnp25Q8VIK1 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Snrnp25Q8VIK1 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Snrnp25Q8VIK1 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.98■□□□□ 0.47
Snrnp25Q8VIK1 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Snrnp25Q8VIK1 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Snrnp25Q8VIK1 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Snrnp25Q8VIK1 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.98■□□□□ 0.47
Snrnp25Q8VIK1 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Snrnp25Q8VIK1 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Snrnp25Q8VIK1 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Snrnp25Q8VIK1 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Snrnp25Q8VIK1 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Snrnp25Q8VIK1 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Snrnp25Q8VIK1 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Snrnp25Q8VIK1 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Snrnp25Q8VIK1 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Snrnp25Q8VIK1 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Snrnp25Q8VIK1 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Snrnp25Q8VIK1 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Snrnp25Q8VIK1 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Snrnp25Q8VIK1 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Snrnp25Q8VIK1 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Snrnp25Q8VIK1 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Snrnp25Q8VIK1 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Snrnp25Q8VIK1 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.97■□□□□ 0.47
Snrnp25Q8VIK1 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Snrnp25Q8VIK1 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Snrnp25Q8VIK1 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Snrnp25Q8VIK1 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Snrnp25Q8VIK1 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Snrnp25Q8VIK1 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Snrnp25Q8VIK1 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Snrnp25Q8VIK1 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Snrnp25Q8VIK1 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.96■□□□□ 0.47
Snrnp25Q8VIK1 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Snrnp25Q8VIK1 Mir7071-201ENSMUST00000184847 69 ntBASIC17.96■□□□□ 0.47
Snrnp25Q8VIK1 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Snrnp25Q8VIK1 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Snrnp25Q8VIK1 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Snrnp25Q8VIK1 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Snrnp25Q8VIK1 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Snrnp25Q8VIK1 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Snrnp25Q8VIK1 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Snrnp25Q8VIK1 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Snrnp25Q8VIK1 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Snrnp25Q8VIK1 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Snrnp25Q8VIK1 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Snrnp25Q8VIK1 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Snrnp25Q8VIK1 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Snrnp25Q8VIK1 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Snrnp25Q8VIK1 Gm6433-201ENSMUST00000118634 875 ntBASIC17.95■□□□□ 0.46
Snrnp25Q8VIK1 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.95■□□□□ 0.46
Snrnp25Q8VIK1 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Snrnp25Q8VIK1 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Snrnp25Q8VIK1 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Snrnp25Q8VIK1 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Snrnp25Q8VIK1 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Snrnp25Q8VIK1 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Snrnp25Q8VIK1 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.95■□□□□ 0.46
Snrnp25Q8VIK1 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Snrnp25Q8VIK1 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Snrnp25Q8VIK1 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Snrnp25Q8VIK1 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.94■□□□□ 0.46
Snrnp25Q8VIK1 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Snrnp25Q8VIK1 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Snrnp25Q8VIK1 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Snrnp25Q8VIK1 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms