Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim60Q8VI40 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Trim60Q8VI40 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim60Q8VI40 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trim60Q8VI40 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim60Q8VI40 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Trim60Q8VI40 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Trim60Q8VI40 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim60Q8VI40 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim60Q8VI40 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim60Q8VI40 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trim60Q8VI40 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trim60Q8VI40 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trim60Q8VI40 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.77■□□□□ 0.44
Trim60Q8VI40 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.77■□□□□ 0.44
Trim60Q8VI40 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim60Q8VI40 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.77■□□□□ 0.44
Trim60Q8VI40 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Trim60Q8VI40 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Trim60Q8VI40 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim60Q8VI40 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim60Q8VI40 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trim60Q8VI40 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim60Q8VI40 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.77■□□□□ 0.44
Trim60Q8VI40 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trim60Q8VI40 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Trim60Q8VI40 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Trim60Q8VI40 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Trim60Q8VI40 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Trim60Q8VI40 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Trim60Q8VI40 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim60Q8VI40 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim60Q8VI40 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim60Q8VI40 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Trim60Q8VI40 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Trim60Q8VI40 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.76■□□□□ 0.43
Trim60Q8VI40 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Trim60Q8VI40 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.76■□□□□ 0.43
Trim60Q8VI40 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.76■□□□□ 0.43
Trim60Q8VI40 Gm37179-201ENSMUST00000194862 823 ntBASIC17.76■□□□□ 0.43
Trim60Q8VI40 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim60Q8VI40 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim60Q8VI40 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.76■□□□□ 0.43
Trim60Q8VI40 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim60Q8VI40 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim60Q8VI40 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Trim60Q8VI40 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Trim60Q8VI40 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim60Q8VI40 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim60Q8VI40 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Trim60Q8VI40 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim60Q8VI40 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trim60Q8VI40 Haglr-201ENSMUST00000100000 2085 ntBASIC17.75■□□□□ 0.43
Trim60Q8VI40 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim60Q8VI40 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.75■□□□□ 0.43
Trim60Q8VI40 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim60Q8VI40 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.75■□□□□ 0.43
Trim60Q8VI40 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.75■□□□□ 0.43
Trim60Q8VI40 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Trim60Q8VI40 Gm29257-201ENSMUST00000186115 639 ntBASIC17.75■□□□□ 0.43
Trim60Q8VI40 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Trim60Q8VI40 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim60Q8VI40 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim60Q8VI40 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim60Q8VI40 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim60Q8VI40 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim60Q8VI40 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim60Q8VI40 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim60Q8VI40 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim60Q8VI40 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim60Q8VI40 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim60Q8VI40 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim60Q8VI40 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Trim60Q8VI40 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim60Q8VI40 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.74■□□□□ 0.43
Trim60Q8VI40 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim60Q8VI40 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim60Q8VI40 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim60Q8VI40 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.74■□□□□ 0.43
Trim60Q8VI40 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim60Q8VI40 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim60Q8VI40 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim60Q8VI40 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim60Q8VI40 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim60Q8VI40 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim60Q8VI40 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim60Q8VI40 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim60Q8VI40 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim60Q8VI40 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim60Q8VI40 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim60Q8VI40 Gm12896-201ENSMUST00000118430 226 ntBASIC17.73■□□□□ 0.43
Trim60Q8VI40 Gm13158-201ENSMUST00000122007 736 ntBASIC17.73■□□□□ 0.43
Trim60Q8VI40 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.73■□□□□ 0.43
Trim60Q8VI40 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim60Q8VI40 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim60Q8VI40 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim60Q8VI40 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim60Q8VI40 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim60Q8VI40 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim60Q8VI40 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms