Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cspg4Q8VHY0 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Cspg4Q8VHY0 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC14.74□□□□□ -0.05
Cspg4Q8VHY0 Gm11779-201ENSMUST00000118541 368 ntBASIC14.74□□□□□ -0.05
Cspg4Q8VHY0 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
Cspg4Q8VHY0 Wdyhv1-206ENSMUST00000227142 786 ntBASIC14.74□□□□□ -0.05
Cspg4Q8VHY0 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC14.73□□□□□ -0.05
Cspg4Q8VHY0 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cspg4Q8VHY0 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cspg4Q8VHY0 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
Cspg4Q8VHY0 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cspg4Q8VHY0 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cspg4Q8VHY0 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Cspg4Q8VHY0 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.73□□□□□ -0.05
Cspg4Q8VHY0 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cspg4Q8VHY0 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Cspg4Q8VHY0 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cspg4Q8VHY0 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Cspg4Q8VHY0 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cspg4Q8VHY0 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cspg4Q8VHY0 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cspg4Q8VHY0 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cspg4Q8VHY0 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC14.73□□□□□ -0.05
Cspg4Q8VHY0 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC14.73□□□□□ -0.05
Cspg4Q8VHY0 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cspg4Q8VHY0 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cspg4Q8VHY0 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.72□□□□□ -0.05
Cspg4Q8VHY0 Gm12350-201ENSMUST00000121208 462 ntBASIC14.72□□□□□ -0.05
Cspg4Q8VHY0 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Cspg4Q8VHY0 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cspg4Q8VHY0 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cspg4Q8VHY0 Gm37374-201ENSMUST00000194954 1829 ntBASIC14.72□□□□□ -0.05
Cspg4Q8VHY0 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cspg4Q8VHY0 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14.72□□□□□ -0.05
Cspg4Q8VHY0 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cspg4Q8VHY0 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cspg4Q8VHY0 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cspg4Q8VHY0 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cspg4Q8VHY0 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cspg4Q8VHY0 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cspg4Q8VHY0 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cspg4Q8VHY0 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cspg4Q8VHY0 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cspg4Q8VHY0 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cspg4Q8VHY0 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cspg4Q8VHY0 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Cspg4Q8VHY0 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Cspg4Q8VHY0 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cspg4Q8VHY0 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.71□□□□□ -0.05
Cspg4Q8VHY0 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cspg4Q8VHY0 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cspg4Q8VHY0 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cspg4Q8VHY0 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cspg4Q8VHY0 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cspg4Q8VHY0 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cspg4Q8VHY0 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cspg4Q8VHY0 Gm15372-201ENSMUST00000120729 834 ntBASIC14.71□□□□□ -0.05
Cspg4Q8VHY0 Gm24513-201ENSMUST00000174964 138 ntBASIC14.71□□□□□ -0.05
Cspg4Q8VHY0 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cspg4Q8VHY0 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cspg4Q8VHY0 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cspg4Q8VHY0 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cspg4Q8VHY0 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cspg4Q8VHY0 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cspg4Q8VHY0 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Cspg4Q8VHY0 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC14.7□□□□□ -0.06
Cspg4Q8VHY0 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.7□□□□□ -0.06
Cspg4Q8VHY0 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.7□□□□□ -0.06
Cspg4Q8VHY0 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.7□□□□□ -0.06
Cspg4Q8VHY0 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cspg4Q8VHY0 Gm6376-201ENSMUST00000209407 580 ntBASIC14.7□□□□□ -0.06
Cspg4Q8VHY0 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cspg4Q8VHY0 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Cspg4Q8VHY0 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cspg4Q8VHY0 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
Cspg4Q8VHY0 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cspg4Q8VHY0 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
Cspg4Q8VHY0 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Cspg4Q8VHY0 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cspg4Q8VHY0 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Cspg4Q8VHY0 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Cspg4Q8VHY0 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Cspg4Q8VHY0 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.7□□□□□ -0.06
Cspg4Q8VHY0 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.7□□□□□ -0.06
Cspg4Q8VHY0 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.7□□□□□ -0.06
Cspg4Q8VHY0 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cspg4Q8VHY0 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cspg4Q8VHY0 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cspg4Q8VHY0 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
Cspg4Q8VHY0 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cspg4Q8VHY0 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cspg4Q8VHY0 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cspg4Q8VHY0 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cspg4Q8VHY0 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cspg4Q8VHY0 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cspg4Q8VHY0 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cspg4Q8VHY0 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cspg4Q8VHY0 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.69□□□□□ -0.06
Cspg4Q8VHY0 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.69□□□□□ -0.06
Cspg4Q8VHY0 Mir5131-201ENSMUST00000175426 93 ntBASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms