Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdhr1Q8VHP6 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.76■□□□□ 0.27
Cdhr1Q8VHP6 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdhr1Q8VHP6 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cdhr1Q8VHP6 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdhr1Q8VHP6 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Cdhr1Q8VHP6 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdhr1Q8VHP6 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdhr1Q8VHP6 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdhr1Q8VHP6 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdhr1Q8VHP6 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdhr1Q8VHP6 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdhr1Q8VHP6 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Cdhr1Q8VHP6 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cdhr1Q8VHP6 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.75■□□□□ 0.27
Cdhr1Q8VHP6 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.75■□□□□ 0.27
Cdhr1Q8VHP6 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.75■□□□□ 0.27
Cdhr1Q8VHP6 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdhr1Q8VHP6 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
Cdhr1Q8VHP6 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.75■□□□□ 0.27
Cdhr1Q8VHP6 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.75■□□□□ 0.27
Cdhr1Q8VHP6 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdhr1Q8VHP6 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Cdhr1Q8VHP6 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdhr1Q8VHP6 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cdhr1Q8VHP6 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdhr1Q8VHP6 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Cdhr1Q8VHP6 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdhr1Q8VHP6 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdhr1Q8VHP6 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdhr1Q8VHP6 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Cdhr1Q8VHP6 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.74■□□□□ 0.27
Cdhr1Q8VHP6 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cdhr1Q8VHP6 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdhr1Q8VHP6 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Cdhr1Q8VHP6 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdhr1Q8VHP6 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdhr1Q8VHP6 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdhr1Q8VHP6 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdhr1Q8VHP6 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdhr1Q8VHP6 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdhr1Q8VHP6 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdhr1Q8VHP6 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cdhr1Q8VHP6 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.74■□□□□ 0.27
Cdhr1Q8VHP6 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cdhr1Q8VHP6 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdhr1Q8VHP6 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdhr1Q8VHP6 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdhr1Q8VHP6 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.73■□□□□ 0.27
Cdhr1Q8VHP6 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdhr1Q8VHP6 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cdhr1Q8VHP6 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdhr1Q8VHP6 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdhr1Q8VHP6 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdhr1Q8VHP6 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cdhr1Q8VHP6 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdhr1Q8VHP6 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdhr1Q8VHP6 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdhr1Q8VHP6 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Cdhr1Q8VHP6 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdhr1Q8VHP6 Gm14859-201ENSMUST00000117752 357 ntBASIC16.73■□□□□ 0.27
Cdhr1Q8VHP6 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.73■□□□□ 0.27
Cdhr1Q8VHP6 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdhr1Q8VHP6 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdhr1Q8VHP6 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdhr1Q8VHP6 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cdhr1Q8VHP6 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cdhr1Q8VHP6 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdhr1Q8VHP6 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdhr1Q8VHP6 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cdhr1Q8VHP6 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdhr1Q8VHP6 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cdhr1Q8VHP6 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdhr1Q8VHP6 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdhr1Q8VHP6 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Cdhr1Q8VHP6 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Cdhr1Q8VHP6 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdhr1Q8VHP6 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdhr1Q8VHP6 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdhr1Q8VHP6 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdhr1Q8VHP6 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdhr1Q8VHP6 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cdhr1Q8VHP6 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdhr1Q8VHP6 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdhr1Q8VHP6 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Cdhr1Q8VHP6 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.72■□□□□ 0.27
Cdhr1Q8VHP6 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.72■□□□□ 0.27
Cdhr1Q8VHP6 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cdhr1Q8VHP6 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdhr1Q8VHP6 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Cdhr1Q8VHP6 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdhr1Q8VHP6 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.72■□□□□ 0.27
Cdhr1Q8VHP6 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdhr1Q8VHP6 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.71■□□□□ 0.27
Cdhr1Q8VHP6 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cdhr1Q8VHP6 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdhr1Q8VHP6 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdhr1Q8VHP6 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdhr1Q8VHP6 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdhr1Q8VHP6 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms