Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps4aQ8VEJ9 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.65■□□□□ 0.26
Vps4aQ8VEJ9 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.65■□□□□ 0.26
Vps4aQ8VEJ9 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps4aQ8VEJ9 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Vps4aQ8VEJ9 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.65■□□□□ 0.26
Vps4aQ8VEJ9 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps4aQ8VEJ9 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps4aQ8VEJ9 Gm13158-201ENSMUST00000122007 736 ntBASIC16.65■□□□□ 0.26
Vps4aQ8VEJ9 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Vps4aQ8VEJ9 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps4aQ8VEJ9 Gm29791-202ENSMUST00000207888 369 ntBASIC16.65■□□□□ 0.26
Vps4aQ8VEJ9 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.65■□□□□ 0.26
Vps4aQ8VEJ9 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps4aQ8VEJ9 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps4aQ8VEJ9 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps4aQ8VEJ9 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps4aQ8VEJ9 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps4aQ8VEJ9 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.65■□□□□ 0.26
Vps4aQ8VEJ9 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps4aQ8VEJ9 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
Vps4aQ8VEJ9 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps4aQ8VEJ9 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
Vps4aQ8VEJ9 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Vps4aQ8VEJ9 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps4aQ8VEJ9 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Vps4aQ8VEJ9 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Vps4aQ8VEJ9 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Vps4aQ8VEJ9 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Vps4aQ8VEJ9 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Vps4aQ8VEJ9 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps4aQ8VEJ9 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Vps4aQ8VEJ9 Gm10418-201ENSMUST00000100943 576 ntBASIC16.64■□□□□ 0.25
Vps4aQ8VEJ9 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.64■□□□□ 0.25
Vps4aQ8VEJ9 Gm43799-201ENSMUST00000201845 579 ntBASIC16.64■□□□□ 0.25
Vps4aQ8VEJ9 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps4aQ8VEJ9 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps4aQ8VEJ9 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.64■□□□□ 0.25
Vps4aQ8VEJ9 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps4aQ8VEJ9 Zfp783-201ENSMUST00000095946 670 ntBASIC16.64■□□□□ 0.25
Vps4aQ8VEJ9 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.64■□□□□ 0.25
Vps4aQ8VEJ9 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps4aQ8VEJ9 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.64■□□□□ 0.25
Vps4aQ8VEJ9 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Vps4aQ8VEJ9 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Vps4aQ8VEJ9 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
Vps4aQ8VEJ9 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.64■□□□□ 0.25
Vps4aQ8VEJ9 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps4aQ8VEJ9 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Vps4aQ8VEJ9 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Vps4aQ8VEJ9 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Vps4aQ8VEJ9 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Vps4aQ8VEJ9 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps4aQ8VEJ9 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps4aQ8VEJ9 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.63■□□□□ 0.25
Vps4aQ8VEJ9 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps4aQ8VEJ9 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps4aQ8VEJ9 Flg-201ENSMUST00000050758 1488 ntBASIC16.63■□□□□ 0.25
Vps4aQ8VEJ9 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps4aQ8VEJ9 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps4aQ8VEJ9 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps4aQ8VEJ9 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps4aQ8VEJ9 Gm6433-201ENSMUST00000118634 875 ntBASIC16.63■□□□□ 0.25
Vps4aQ8VEJ9 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Vps4aQ8VEJ9 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.63■□□□□ 0.25
Vps4aQ8VEJ9 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.63■□□□□ 0.25
Vps4aQ8VEJ9 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.63■□□□□ 0.25
Vps4aQ8VEJ9 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.63■□□□□ 0.25
Vps4aQ8VEJ9 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Vps4aQ8VEJ9 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps4aQ8VEJ9 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps4aQ8VEJ9 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps4aQ8VEJ9 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Vps4aQ8VEJ9 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps4aQ8VEJ9 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Vps4aQ8VEJ9 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps4aQ8VEJ9 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps4aQ8VEJ9 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Vps4aQ8VEJ9 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps4aQ8VEJ9 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Vps4aQ8VEJ9 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Vps4aQ8VEJ9 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vps4aQ8VEJ9 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vps4aQ8VEJ9 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Vps4aQ8VEJ9 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.62■□□□□ 0.25
Vps4aQ8VEJ9 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vps4aQ8VEJ9 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Vps4aQ8VEJ9 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Vps4aQ8VEJ9 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vps4aQ8VEJ9 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Vps4aQ8VEJ9 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vps4aQ8VEJ9 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vps4aQ8VEJ9 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vps4aQ8VEJ9 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vps4aQ8VEJ9 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vps4aQ8VEJ9 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps4aQ8VEJ9 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.61■□□□□ 0.25
Vps4aQ8VEJ9 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Vps4aQ8VEJ9 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps4aQ8VEJ9 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms