Protein–RNA interactions for Protein: Q8VE09

Ttc39c, Tetratricopeptide repeat protein 39C, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39cQ8VE09 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ttc39cQ8VE09 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Ttc39cQ8VE09 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ttc39cQ8VE09 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ttc39cQ8VE09 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ttc39cQ8VE09 Mir5130-201ENSMUST00000175160 84 ntBASIC17.64■□□□□ 0.41
Ttc39cQ8VE09 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ttc39cQ8VE09 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ttc39cQ8VE09 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ttc39cQ8VE09 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.64■□□□□ 0.41
Ttc39cQ8VE09 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ttc39cQ8VE09 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ttc39cQ8VE09 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ttc39cQ8VE09 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ttc39cQ8VE09 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ttc39cQ8VE09 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ttc39cQ8VE09 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.63■□□□□ 0.41
Ttc39cQ8VE09 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ttc39cQ8VE09 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ttc39cQ8VE09 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Ttc39cQ8VE09 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Ttc39cQ8VE09 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ttc39cQ8VE09 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ttc39cQ8VE09 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ttc39cQ8VE09 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ttc39cQ8VE09 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.63■□□□□ 0.41
Ttc39cQ8VE09 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ttc39cQ8VE09 Il3ra-202ENSMUST00000223589 738 ntBASIC17.63■□□□□ 0.41
Ttc39cQ8VE09 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ttc39cQ8VE09 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ttc39cQ8VE09 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.63■□□□□ 0.41
Ttc39cQ8VE09 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Ttc39cQ8VE09 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ttc39cQ8VE09 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Ttc39cQ8VE09 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ttc39cQ8VE09 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Ttc39cQ8VE09 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ttc39cQ8VE09 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Ttc39cQ8VE09 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ttc39cQ8VE09 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ttc39cQ8VE09 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ttc39cQ8VE09 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ttc39cQ8VE09 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Ttc39cQ8VE09 Gm16061-201ENSMUST00000122167 857 ntBASIC17.62■□□□□ 0.41
Ttc39cQ8VE09 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.62■□□□□ 0.41
Ttc39cQ8VE09 Gm17661-201ENSMUST00000170317 270 ntBASIC17.62■□□□□ 0.41
Ttc39cQ8VE09 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ttc39cQ8VE09 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ttc39cQ8VE09 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ttc39cQ8VE09 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ttc39cQ8VE09 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ttc39cQ8VE09 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Ttc39cQ8VE09 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Ttc39cQ8VE09 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ttc39cQ8VE09 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ttc39cQ8VE09 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ttc39cQ8VE09 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ttc39cQ8VE09 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ttc39cQ8VE09 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ttc39cQ8VE09 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ttc39cQ8VE09 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ttc39cQ8VE09 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ttc39cQ8VE09 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.61■□□□□ 0.41
Ttc39cQ8VE09 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ttc39cQ8VE09 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Ttc39cQ8VE09 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ttc39cQ8VE09 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ttc39cQ8VE09 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.61■□□□□ 0.41
Ttc39cQ8VE09 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ttc39cQ8VE09 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ttc39cQ8VE09 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ttc39cQ8VE09 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ttc39cQ8VE09 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Ttc39cQ8VE09 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.6■□□□□ 0.41
Ttc39cQ8VE09 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ttc39cQ8VE09 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ttc39cQ8VE09 Gm13474-201ENSMUST00000122466 815 ntBASIC17.6■□□□□ 0.41
Ttc39cQ8VE09 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.6■□□□□ 0.41
Ttc39cQ8VE09 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ttc39cQ8VE09 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.6■□□□□ 0.41
Ttc39cQ8VE09 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.6■□□□□ 0.41
Ttc39cQ8VE09 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ttc39cQ8VE09 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ttc39cQ8VE09 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ttc39cQ8VE09 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ttc39cQ8VE09 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ttc39cQ8VE09 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ttc39cQ8VE09 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ttc39cQ8VE09 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ttc39cQ8VE09 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.6■□□□□ 0.41
Ttc39cQ8VE09 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ttc39cQ8VE09 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ttc39cQ8VE09 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Ttc39cQ8VE09 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ttc39cQ8VE09 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ttc39cQ8VE09 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ttc39cQ8VE09 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ttc39cQ8VE09 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Ttc39cQ8VE09 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ttc39cQ8VE09 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms