Protein–RNA interactions for Protein: Q8VDB9

Slc6a20a, Sodium- and chloride-dependent transporter XTRP3A, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20aQ8VDB9 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Slc6a20aQ8VDB9 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc6a20aQ8VDB9 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc6a20aQ8VDB9 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc6a20aQ8VDB9 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Slc6a20aQ8VDB9 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc6a20aQ8VDB9 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Slc6a20aQ8VDB9 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc6a20aQ8VDB9 Gm24841-201ENSMUST00000158676 357 ntBASIC16.94■□□□□ 0.3
Slc6a20aQ8VDB9 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Slc6a20aQ8VDB9 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc6a20aQ8VDB9 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc6a20aQ8VDB9 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc6a20aQ8VDB9 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc6a20aQ8VDB9 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Slc6a20aQ8VDB9 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Slc6a20aQ8VDB9 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc6a20aQ8VDB9 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc6a20aQ8VDB9 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.94■□□□□ 0.3
Slc6a20aQ8VDB9 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc6a20aQ8VDB9 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Slc6a20aQ8VDB9 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slc6a20aQ8VDB9 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.93■□□□□ 0.3
Slc6a20aQ8VDB9 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slc6a20aQ8VDB9 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slc6a20aQ8VDB9 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slc6a20aQ8VDB9 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Slc6a20aQ8VDB9 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Slc6a20aQ8VDB9 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slc6a20aQ8VDB9 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slc6a20aQ8VDB9 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.93■□□□□ 0.3
Slc6a20aQ8VDB9 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slc6a20aQ8VDB9 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Slc6a20aQ8VDB9 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Slc6a20aQ8VDB9 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Slc6a20aQ8VDB9 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slc6a20aQ8VDB9 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Slc6a20aQ8VDB9 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Slc6a20aQ8VDB9 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Slc6a20aQ8VDB9 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Slc6a20aQ8VDB9 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.92■□□□□ 0.3
Slc6a20aQ8VDB9 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Slc6a20aQ8VDB9 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Slc6a20aQ8VDB9 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.92■□□□□ 0.3
Slc6a20aQ8VDB9 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Slc6a20aQ8VDB9 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.92■□□□□ 0.3
Slc6a20aQ8VDB9 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Slc6a20aQ8VDB9 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Slc6a20aQ8VDB9 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Slc6a20aQ8VDB9 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Slc6a20aQ8VDB9 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Slc6a20aQ8VDB9 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slc6a20aQ8VDB9 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.91■□□□□ 0.3
Slc6a20aQ8VDB9 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slc6a20aQ8VDB9 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Slc6a20aQ8VDB9 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slc6a20aQ8VDB9 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Slc6a20aQ8VDB9 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Slc6a20aQ8VDB9 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slc6a20aQ8VDB9 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Slc6a20aQ8VDB9 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Slc6a20aQ8VDB9 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
Slc6a20aQ8VDB9 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.91■□□□□ 0.3
Slc6a20aQ8VDB9 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.91■□□□□ 0.3
Slc6a20aQ8VDB9 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slc6a20aQ8VDB9 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slc6a20aQ8VDB9 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
Slc6a20aQ8VDB9 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slc6a20aQ8VDB9 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slc6a20aQ8VDB9 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slc6a20aQ8VDB9 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Slc6a20aQ8VDB9 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slc6a20aQ8VDB9 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slc6a20aQ8VDB9 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Slc6a20aQ8VDB9 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Slc6a20aQ8VDB9 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Slc6a20aQ8VDB9 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Slc6a20aQ8VDB9 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Slc6a20aQ8VDB9 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Slc6a20aQ8VDB9 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.9■□□□□ 0.3
Slc6a20aQ8VDB9 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.9■□□□□ 0.3
Slc6a20aQ8VDB9 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Slc6a20aQ8VDB9 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Slc6a20aQ8VDB9 Gm13168-201ENSMUST00000121771 632 ntBASIC16.9■□□□□ 0.3
Slc6a20aQ8VDB9 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Slc6a20aQ8VDB9 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Slc6a20aQ8VDB9 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.9■□□□□ 0.3
Slc6a20aQ8VDB9 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Slc6a20aQ8VDB9 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Slc6a20aQ8VDB9 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Slc6a20aQ8VDB9 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Slc6a20aQ8VDB9 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.9■□□□□ 0.3
Slc6a20aQ8VDB9 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Slc6a20aQ8VDB9 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Slc6a20aQ8VDB9 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Slc6a20aQ8VDB9 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Slc6a20aQ8VDB9 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Slc6a20aQ8VDB9 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.89■□□□□ 0.29
Slc6a20aQ8VDB9 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Slc6a20aQ8VDB9 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms