Protein–RNA interactions for Protein: Q8VCE1

Dnajc28, DnaJ homolog subfamily C member 28, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnajc28Q8VCE1 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Dnajc28Q8VCE1 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Dnajc28Q8VCE1 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Dnajc28Q8VCE1 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Dnajc28Q8VCE1 Gm16061-201ENSMUST00000122167 857 ntBASIC18.71■□□□□ 0.59
Dnajc28Q8VCE1 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Dnajc28Q8VCE1 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Dnajc28Q8VCE1 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Dnajc28Q8VCE1 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Dnajc28Q8VCE1 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Dnajc28Q8VCE1 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.71■□□□□ 0.59
Dnajc28Q8VCE1 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Dnajc28Q8VCE1 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Dnajc28Q8VCE1 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Dnajc28Q8VCE1 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Dnajc28Q8VCE1 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Dnajc28Q8VCE1 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Dnajc28Q8VCE1 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Dnajc28Q8VCE1 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Dnajc28Q8VCE1 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Dnajc28Q8VCE1 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Dnajc28Q8VCE1 Gm14859-201ENSMUST00000117752 357 ntBASIC18.7■□□□□ 0.58
Dnajc28Q8VCE1 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.7■□□□□ 0.58
Dnajc28Q8VCE1 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.7■□□□□ 0.58
Dnajc28Q8VCE1 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Dnajc28Q8VCE1 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Dnajc28Q8VCE1 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
Dnajc28Q8VCE1 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Dnajc28Q8VCE1 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Dnajc28Q8VCE1 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Dnajc28Q8VCE1 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Dnajc28Q8VCE1 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.7■□□□□ 0.58
Dnajc28Q8VCE1 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
Dnajc28Q8VCE1 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.7■□□□□ 0.58
Dnajc28Q8VCE1 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.7■□□□□ 0.58
Dnajc28Q8VCE1 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Dnajc28Q8VCE1 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Dnajc28Q8VCE1 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Dnajc28Q8VCE1 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.69■□□□□ 0.58
Dnajc28Q8VCE1 Gm29791-202ENSMUST00000207888 369 ntBASIC18.69■□□□□ 0.58
Dnajc28Q8VCE1 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Dnajc28Q8VCE1 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Dnajc28Q8VCE1 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Dnajc28Q8VCE1 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Dnajc28Q8VCE1 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Dnajc28Q8VCE1 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Dnajc28Q8VCE1 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.69■□□□□ 0.58
Dnajc28Q8VCE1 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Dnajc28Q8VCE1 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Dnajc28Q8VCE1 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.68■□□□□ 0.58
Dnajc28Q8VCE1 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Dnajc28Q8VCE1 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Dnajc28Q8VCE1 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Dnajc28Q8VCE1 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Dnajc28Q8VCE1 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Dnajc28Q8VCE1 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Dnajc28Q8VCE1 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Dnajc28Q8VCE1 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Dnajc28Q8VCE1 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Dnajc28Q8VCE1 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Dnajc28Q8VCE1 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Dnajc28Q8VCE1 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Dnajc28Q8VCE1 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Dnajc28Q8VCE1 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Dnajc28Q8VCE1 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.67■□□□□ 0.58
Dnajc28Q8VCE1 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Dnajc28Q8VCE1 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Dnajc28Q8VCE1 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.67■□□□□ 0.58
Dnajc28Q8VCE1 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Dnajc28Q8VCE1 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Dnajc28Q8VCE1 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Dnajc28Q8VCE1 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Dnajc28Q8VCE1 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Dnajc28Q8VCE1 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Dnajc28Q8VCE1 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Dnajc28Q8VCE1 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Dnajc28Q8VCE1 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.66■□□□□ 0.58
Dnajc28Q8VCE1 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Dnajc28Q8VCE1 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Dnajc28Q8VCE1 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.66■□□□□ 0.58
Dnajc28Q8VCE1 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Dnajc28Q8VCE1 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Dnajc28Q8VCE1 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Dnajc28Q8VCE1 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Dnajc28Q8VCE1 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Dnajc28Q8VCE1 Gm13474-201ENSMUST00000122466 815 ntBASIC18.66■□□□□ 0.58
Dnajc28Q8VCE1 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Dnajc28Q8VCE1 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.66■□□□□ 0.58
Dnajc28Q8VCE1 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Dnajc28Q8VCE1 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.66■□□□□ 0.58
Dnajc28Q8VCE1 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Dnajc28Q8VCE1 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Dnajc28Q8VCE1 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Dnajc28Q8VCE1 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Dnajc28Q8VCE1 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Dnajc28Q8VCE1 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Dnajc28Q8VCE1 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.66■□□□□ 0.58
Dnajc28Q8VCE1 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Dnajc28Q8VCE1 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Dnajc28Q8VCE1 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms