Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ndc1Q8VCB1 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
Ndc1Q8VCB1 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ndc1Q8VCB1 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.2■□□□□ 0.18
Ndc1Q8VCB1 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ndc1Q8VCB1 Mir5130-201ENSMUST00000175160 84 ntBASIC16.2■□□□□ 0.18
Ndc1Q8VCB1 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Ndc1Q8VCB1 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ndc1Q8VCB1 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ndc1Q8VCB1 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ndc1Q8VCB1 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ndc1Q8VCB1 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ndc1Q8VCB1 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ndc1Q8VCB1 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ndc1Q8VCB1 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ndc1Q8VCB1 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ndc1Q8VCB1 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ndc1Q8VCB1 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ndc1Q8VCB1 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ndc1Q8VCB1 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ndc1Q8VCB1 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ndc1Q8VCB1 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ndc1Q8VCB1 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
Ndc1Q8VCB1 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.19■□□□□ 0.18
Ndc1Q8VCB1 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ndc1Q8VCB1 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ndc1Q8VCB1 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Ndc1Q8VCB1 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.19■□□□□ 0.18
Ndc1Q8VCB1 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ndc1Q8VCB1 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Ndc1Q8VCB1 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ndc1Q8VCB1 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ndc1Q8VCB1 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ndc1Q8VCB1 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ndc1Q8VCB1 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Ndc1Q8VCB1 Gm6659-201ENSMUST00000174752 547 ntBASIC16.18■□□□□ 0.18
Ndc1Q8VCB1 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.18■□□□□ 0.18
Ndc1Q8VCB1 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Ndc1Q8VCB1 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ndc1Q8VCB1 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.18■□□□□ 0.18
Ndc1Q8VCB1 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.18■□□□□ 0.18
Ndc1Q8VCB1 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ndc1Q8VCB1 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ndc1Q8VCB1 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ndc1Q8VCB1 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ndc1Q8VCB1 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ndc1Q8VCB1 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ndc1Q8VCB1 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ndc1Q8VCB1 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
Ndc1Q8VCB1 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
Ndc1Q8VCB1 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ndc1Q8VCB1 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ndc1Q8VCB1 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ndc1Q8VCB1 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.17■□□□□ 0.18
Ndc1Q8VCB1 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ndc1Q8VCB1 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Ndc1Q8VCB1 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.17■□□□□ 0.18
Ndc1Q8VCB1 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ndc1Q8VCB1 Gm7791-201ENSMUST00000219066 539 ntBASIC16.17■□□□□ 0.18
Ndc1Q8VCB1 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ndc1Q8VCB1 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ndc1Q8VCB1 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ndc1Q8VCB1 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ndc1Q8VCB1 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ndc1Q8VCB1 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ndc1Q8VCB1 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ndc1Q8VCB1 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ndc1Q8VCB1 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Ndc1Q8VCB1 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ndc1Q8VCB1 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ndc1Q8VCB1 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ndc1Q8VCB1 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ndc1Q8VCB1 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ndc1Q8VCB1 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ndc1Q8VCB1 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
Ndc1Q8VCB1 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ndc1Q8VCB1 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.16■□□□□ 0.18
Ndc1Q8VCB1 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.16■□□□□ 0.18
Ndc1Q8VCB1 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Ndc1Q8VCB1 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ndc1Q8VCB1 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ndc1Q8VCB1 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ndc1Q8VCB1 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ndc1Q8VCB1 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ndc1Q8VCB1 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.16■□□□□ 0.18
Ndc1Q8VCB1 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Ndc1Q8VCB1 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.15■□□□□ 0.18
Ndc1Q8VCB1 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ndc1Q8VCB1 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ndc1Q8VCB1 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Ndc1Q8VCB1 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Ndc1Q8VCB1 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ndc1Q8VCB1 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Ndc1Q8VCB1 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ndc1Q8VCB1 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.15■□□□□ 0.18
Ndc1Q8VCB1 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ndc1Q8VCB1 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.14■□□□□ 0.18
Ndc1Q8VCB1 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Ndc1Q8VCB1 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ndc1Q8VCB1 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms