Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Rnf8Q8VC56 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf8Q8VC56 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf8Q8VC56 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf8Q8VC56 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf8Q8VC56 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.54■□□□□ 0.24
Rnf8Q8VC56 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.54■□□□□ 0.24
Rnf8Q8VC56 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf8Q8VC56 Gm11249-201ENSMUST00000117071 859 ntBASIC16.54■□□□□ 0.24
Rnf8Q8VC56 Gm11927-201ENSMUST00000118472 759 ntBASIC16.54■□□□□ 0.24
Rnf8Q8VC56 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.54■□□□□ 0.24
Rnf8Q8VC56 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf8Q8VC56 Gm22240-201ENSMUST00000175225 82 ntBASIC16.54■□□□□ 0.24
Rnf8Q8VC56 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf8Q8VC56 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf8Q8VC56 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
Rnf8Q8VC56 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf8Q8VC56 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf8Q8VC56 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf8Q8VC56 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
Rnf8Q8VC56 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.54■□□□□ 0.24
Rnf8Q8VC56 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf8Q8VC56 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf8Q8VC56 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.53■□□□□ 0.24
Rnf8Q8VC56 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf8Q8VC56 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.53■□□□□ 0.24
Rnf8Q8VC56 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Rnf8Q8VC56 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf8Q8VC56 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.53■□□□□ 0.24
Rnf8Q8VC56 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf8Q8VC56 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf8Q8VC56 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf8Q8VC56 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf8Q8VC56 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf8Q8VC56 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf8Q8VC56 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf8Q8VC56 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf8Q8VC56 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf8Q8VC56 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf8Q8VC56 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf8Q8VC56 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf8Q8VC56 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf8Q8VC56 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf8Q8VC56 Mtag2-201ENSMUST00000058665 714 ntBASIC16.52■□□□□ 0.24
Rnf8Q8VC56 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Rnf8Q8VC56 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf8Q8VC56 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rnf8Q8VC56 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rnf8Q8VC56 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Rnf8Q8VC56 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.52■□□□□ 0.23
Rnf8Q8VC56 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Rnf8Q8VC56 Haglr-201ENSMUST00000100000 2085 ntBASIC16.52■□□□□ 0.23
Rnf8Q8VC56 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf8Q8VC56 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.51■□□□□ 0.23
Rnf8Q8VC56 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.51■□□□□ 0.23
Rnf8Q8VC56 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf8Q8VC56 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf8Q8VC56 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf8Q8VC56 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Rnf8Q8VC56 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf8Q8VC56 Gm5643-201ENSMUST00000117081 966 ntBASIC16.51■□□□□ 0.23
Rnf8Q8VC56 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.51■□□□□ 0.23
Rnf8Q8VC56 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf8Q8VC56 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf8Q8VC56 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.51■□□□□ 0.23
Rnf8Q8VC56 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf8Q8VC56 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.51■□□□□ 0.23
Rnf8Q8VC56 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf8Q8VC56 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.51■□□□□ 0.23
Rnf8Q8VC56 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf8Q8VC56 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Rnf8Q8VC56 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf8Q8VC56 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf8Q8VC56 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf8Q8VC56 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf8Q8VC56 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf8Q8VC56 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf8Q8VC56 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Rnf8Q8VC56 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Rnf8Q8VC56 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf8Q8VC56 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.5■□□□□ 0.23
Rnf8Q8VC56 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.5■□□□□ 0.23
Rnf8Q8VC56 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.5■□□□□ 0.23
Rnf8Q8VC56 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf8Q8VC56 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.5■□□□□ 0.23
Rnf8Q8VC56 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.5■□□□□ 0.23
Rnf8Q8VC56 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf8Q8VC56 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf8Q8VC56 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.5■□□□□ 0.23
Rnf8Q8VC56 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf8Q8VC56 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf8Q8VC56 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf8Q8VC56 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf8Q8VC56 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.5■□□□□ 0.23
Rnf8Q8VC56 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf8Q8VC56 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf8Q8VC56 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf8Q8VC56 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf8Q8VC56 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf8Q8VC56 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms