Protein–RNA interactions for Protein: Q8R307

Vps18, Vacuolar protein sorting-associated protein 18 homolog, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps18Q8R307 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps18Q8R307 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Vps18Q8R307 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps18Q8R307 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Vps18Q8R307 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps18Q8R307 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Vps18Q8R307 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Vps18Q8R307 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps18Q8R307 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps18Q8R307 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.81■□□□□ 0.6
Vps18Q8R307 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps18Q8R307 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Vps18Q8R307 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps18Q8R307 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps18Q8R307 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Vps18Q8R307 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps18Q8R307 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps18Q8R307 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps18Q8R307 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps18Q8R307 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps18Q8R307 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC18.81■□□□□ 0.6
Vps18Q8R307 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Vps18Q8R307 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps18Q8R307 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Vps18Q8R307 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Vps18Q8R307 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Vps18Q8R307 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps18Q8R307 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Vps18Q8R307 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Vps18Q8R307 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps18Q8R307 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps18Q8R307 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps18Q8R307 Gm6365-201ENSMUST00000054711 744 ntBASIC18.8■□□□□ 0.6
Vps18Q8R307 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps18Q8R307 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Vps18Q8R307 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps18Q8R307 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Vps18Q8R307 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps18Q8R307 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps18Q8R307 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps18Q8R307 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps18Q8R307 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC18.8■□□□□ 0.6
Vps18Q8R307 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Vps18Q8R307 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vps18Q8R307 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Vps18Q8R307 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vps18Q8R307 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Vps18Q8R307 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vps18Q8R307 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vps18Q8R307 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vps18Q8R307 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vps18Q8R307 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.79■□□□□ 0.6
Vps18Q8R307 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vps18Q8R307 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.79■□□□□ 0.6
Vps18Q8R307 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.79■□□□□ 0.6
Vps18Q8R307 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Vps18Q8R307 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vps18Q8R307 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vps18Q8R307 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vps18Q8R307 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Vps18Q8R307 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vps18Q8R307 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Vps18Q8R307 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vps18Q8R307 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Vps18Q8R307 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vps18Q8R307 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vps18Q8R307 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Vps18Q8R307 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps18Q8R307 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps18Q8R307 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps18Q8R307 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps18Q8R307 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps18Q8R307 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.78■□□□□ 0.6
Vps18Q8R307 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps18Q8R307 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps18Q8R307 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps18Q8R307 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps18Q8R307 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps18Q8R307 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Vps18Q8R307 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Vps18Q8R307 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.78■□□□□ 0.6
Vps18Q8R307 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps18Q8R307 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps18Q8R307 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps18Q8R307 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Vps18Q8R307 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Vps18Q8R307 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps18Q8R307 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps18Q8R307 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Vps18Q8R307 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps18Q8R307 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps18Q8R307 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC18.77■□□□□ 0.6
Vps18Q8R307 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps18Q8R307 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps18Q8R307 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.6
Vps18Q8R307 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps18Q8R307 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps18Q8R307 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Vps18Q8R307 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Vps18Q8R307 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms