Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Zcchc9Q8R1J3 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Zcchc9Q8R1J3 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Zcchc9Q8R1J3 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Zcchc9Q8R1J3 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Zcchc9Q8R1J3 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Zcchc9Q8R1J3 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Zcchc9Q8R1J3 Gm24841-201ENSMUST00000158676 357 ntBASIC17.11■□□□□ 0.33
Zcchc9Q8R1J3 Ank2-226ENSMUST00000189368 339 ntBASIC17.11■□□□□ 0.33
Zcchc9Q8R1J3 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Zcchc9Q8R1J3 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.11■□□□□ 0.33
Zcchc9Q8R1J3 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Zcchc9Q8R1J3 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Zcchc9Q8R1J3 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.11■□□□□ 0.33
Zcchc9Q8R1J3 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Zcchc9Q8R1J3 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Zcchc9Q8R1J3 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Zcchc9Q8R1J3 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.11■□□□□ 0.33
Zcchc9Q8R1J3 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Zcchc9Q8R1J3 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Zcchc9Q8R1J3 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Zcchc9Q8R1J3 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.1■□□□□ 0.33
Zcchc9Q8R1J3 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Zcchc9Q8R1J3 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Zcchc9Q8R1J3 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Zcchc9Q8R1J3 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Zcchc9Q8R1J3 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Zcchc9Q8R1J3 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Zcchc9Q8R1J3 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Zcchc9Q8R1J3 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Zcchc9Q8R1J3 Gm25016-201ENSMUST00000158399 131 ntBASIC17.1■□□□□ 0.33
Zcchc9Q8R1J3 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Zcchc9Q8R1J3 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Zcchc9Q8R1J3 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Zcchc9Q8R1J3 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Zcchc9Q8R1J3 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.1■□□□□ 0.33
Zcchc9Q8R1J3 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Zcchc9Q8R1J3 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Zcchc9Q8R1J3 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Zcchc9Q8R1J3 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Zcchc9Q8R1J3 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Zcchc9Q8R1J3 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.1■□□□□ 0.33
Zcchc9Q8R1J3 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Zcchc9Q8R1J3 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Zcchc9Q8R1J3 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Zcchc9Q8R1J3 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Zcchc9Q8R1J3 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Zcchc9Q8R1J3 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Zcchc9Q8R1J3 Gm10418-201ENSMUST00000100943 576 ntBASIC17.09■□□□□ 0.33
Zcchc9Q8R1J3 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Zcchc9Q8R1J3 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Zcchc9Q8R1J3 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Zcchc9Q8R1J3 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Zcchc9Q8R1J3 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Zcchc9Q8R1J3 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Zcchc9Q8R1J3 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Zcchc9Q8R1J3 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Zcchc9Q8R1J3 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Zcchc9Q8R1J3 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Zcchc9Q8R1J3 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Zcchc9Q8R1J3 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Zcchc9Q8R1J3 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Zcchc9Q8R1J3 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Zcchc9Q8R1J3 Gm13474-201ENSMUST00000122466 815 ntBASIC17.08■□□□□ 0.32
Zcchc9Q8R1J3 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Zcchc9Q8R1J3 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Zcchc9Q8R1J3 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.08■□□□□ 0.32
Zcchc9Q8R1J3 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Zcchc9Q8R1J3 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Zcchc9Q8R1J3 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Zcchc9Q8R1J3 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Zcchc9Q8R1J3 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Zcchc9Q8R1J3 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Zcchc9Q8R1J3 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Zcchc9Q8R1J3 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Zcchc9Q8R1J3 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Zcchc9Q8R1J3 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Zcchc9Q8R1J3 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Zcchc9Q8R1J3 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Zcchc9Q8R1J3 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.07■□□□□ 0.32
Zcchc9Q8R1J3 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Zcchc9Q8R1J3 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zcchc9Q8R1J3 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Zcchc9Q8R1J3 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zcchc9Q8R1J3 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zcchc9Q8R1J3 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zcchc9Q8R1J3 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Zcchc9Q8R1J3 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zcchc9Q8R1J3 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Zcchc9Q8R1J3 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Zcchc9Q8R1J3 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zcchc9Q8R1J3 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Zcchc9Q8R1J3 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Zcchc9Q8R1J3 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Zcchc9Q8R1J3 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zcchc9Q8R1J3 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zcchc9Q8R1J3 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zcchc9Q8R1J3 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zcchc9Q8R1J3 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zcchc9Q8R1J3 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms