Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Rpp40Q8R1F9 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rpp40Q8R1F9 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rpp40Q8R1F9 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rpp40Q8R1F9 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
Rpp40Q8R1F9 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Rpp40Q8R1F9 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rpp40Q8R1F9 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rpp40Q8R1F9 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rpp40Q8R1F9 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rpp40Q8R1F9 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rpp40Q8R1F9 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Rpp40Q8R1F9 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rpp40Q8R1F9 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rpp40Q8R1F9 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Rpp40Q8R1F9 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
Rpp40Q8R1F9 Gm13474-201ENSMUST00000122466 815 ntBASIC18.38■□□□□ 0.53
Rpp40Q8R1F9 Gm18032-201ENSMUST00000222541 538 ntBASIC18.38■□□□□ 0.53
Rpp40Q8R1F9 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rpp40Q8R1F9 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Rpp40Q8R1F9 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rpp40Q8R1F9 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.38■□□□□ 0.53
Rpp40Q8R1F9 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rpp40Q8R1F9 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rpp40Q8R1F9 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Rpp40Q8R1F9 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rpp40Q8R1F9 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rpp40Q8R1F9 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpp40Q8R1F9 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.37■□□□□ 0.53
Rpp40Q8R1F9 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rpp40Q8R1F9 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpp40Q8R1F9 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Rpp40Q8R1F9 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.37■□□□□ 0.53
Rpp40Q8R1F9 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Rpp40Q8R1F9 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpp40Q8R1F9 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpp40Q8R1F9 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rpp40Q8R1F9 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rpp40Q8R1F9 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpp40Q8R1F9 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpp40Q8R1F9 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Rpp40Q8R1F9 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rpp40Q8R1F9 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpp40Q8R1F9 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpp40Q8R1F9 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpp40Q8R1F9 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.36■□□□□ 0.53
Rpp40Q8R1F9 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpp40Q8R1F9 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.36■□□□□ 0.53
Rpp40Q8R1F9 Gm27000-201ENSMUST00000182943 842 ntBASIC18.36■□□□□ 0.53
Rpp40Q8R1F9 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rpp40Q8R1F9 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rpp40Q8R1F9 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Rpp40Q8R1F9 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
Rpp40Q8R1F9 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpp40Q8R1F9 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpp40Q8R1F9 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpp40Q8R1F9 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Rpp40Q8R1F9 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpp40Q8R1F9 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpp40Q8R1F9 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Rpp40Q8R1F9 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpp40Q8R1F9 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpp40Q8R1F9 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rpp40Q8R1F9 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rpp40Q8R1F9 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpp40Q8R1F9 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rpp40Q8R1F9 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpp40Q8R1F9 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpp40Q8R1F9 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpp40Q8R1F9 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rpp40Q8R1F9 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpp40Q8R1F9 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpp40Q8R1F9 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rpp40Q8R1F9 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpp40Q8R1F9 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rpp40Q8R1F9 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpp40Q8R1F9 Gm7977-201ENSMUST00000193787 748 ntBASIC18.34■□□□□ 0.53
Rpp40Q8R1F9 Gm7213-201ENSMUST00000215977 950 ntBASIC18.34■□□□□ 0.53
Rpp40Q8R1F9 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.34■□□□□ 0.53
Rpp40Q8R1F9 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpp40Q8R1F9 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Rpp40Q8R1F9 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rpp40Q8R1F9 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rpp40Q8R1F9 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpp40Q8R1F9 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.34■□□□□ 0.53
Rpp40Q8R1F9 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.34■□□□□ 0.53
Rpp40Q8R1F9 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpp40Q8R1F9 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpp40Q8R1F9 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpp40Q8R1F9 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Rpp40Q8R1F9 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rpp40Q8R1F9 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rpp40Q8R1F9 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.33■□□□□ 0.53
Rpp40Q8R1F9 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rpp40Q8R1F9 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rpp40Q8R1F9 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rpp40Q8R1F9 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.33■□□□□ 0.52
Rpp40Q8R1F9 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rpp40Q8R1F9 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpp40Q8R1F9 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms