Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim52Q8CDV4 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim52Q8CDV4 Gm6190-201ENSMUST00000220683 1374 ntBASIC21.23■□□□□ 0.99
Trim52Q8CDV4 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim52Q8CDV4 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim52Q8CDV4 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trim52Q8CDV4 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC21.22■□□□□ 0.99
Trim52Q8CDV4 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trim52Q8CDV4 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trim52Q8CDV4 Gm18115-201ENSMUST00000221209 621 ntBASIC21.22■□□□□ 0.99
Trim52Q8CDV4 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim52Q8CDV4 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Trim52Q8CDV4 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trim52Q8CDV4 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
Trim52Q8CDV4 Wnt10b-204ENSMUST00000226655 1807 ntBASIC21.22■□□□□ 0.99
Trim52Q8CDV4 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Trim52Q8CDV4 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC21.22■□□□□ 0.99
Trim52Q8CDV4 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Trim52Q8CDV4 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Trim52Q8CDV4 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim52Q8CDV4 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim52Q8CDV4 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Trim52Q8CDV4 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim52Q8CDV4 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim52Q8CDV4 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Trim52Q8CDV4 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC21.21■□□□□ 0.99
Trim52Q8CDV4 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC21.21■□□□□ 0.99
Trim52Q8CDV4 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC21.21■□□□□ 0.99
Trim52Q8CDV4 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim52Q8CDV4 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Trim52Q8CDV4 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim52Q8CDV4 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim52Q8CDV4 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC21.21■□□□□ 0.99
Trim52Q8CDV4 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Trim52Q8CDV4 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim52Q8CDV4 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC21.2■□□□□ 0.98
Trim52Q8CDV4 Zkscan4-202ENSMUST00000225845 1506 ntBASIC21.2■□□□□ 0.98
Trim52Q8CDV4 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim52Q8CDV4 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim52Q8CDV4 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim52Q8CDV4 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC21.2■□□□□ 0.98
Trim52Q8CDV4 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim52Q8CDV4 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim52Q8CDV4 Dmtn-207ENSMUST00000228001 2437 ntBASIC21.2■□□□□ 0.98
Trim52Q8CDV4 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim52Q8CDV4 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Trim52Q8CDV4 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim52Q8CDV4 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim52Q8CDV4 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Trim52Q8CDV4 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Trim52Q8CDV4 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Trim52Q8CDV4 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Trim52Q8CDV4 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC21.19■□□□□ 0.98
Trim52Q8CDV4 Gm44450-201ENSMUST00000199528 114 ntBASIC21.19■□□□□ 0.98
Trim52Q8CDV4 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Trim52Q8CDV4 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim52Q8CDV4 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim52Q8CDV4 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Trim52Q8CDV4 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim52Q8CDV4 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim52Q8CDV4 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim52Q8CDV4 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC21.18■□□□□ 0.98
Trim52Q8CDV4 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim52Q8CDV4 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim52Q8CDV4 Tfap2a-209ENSMUST00000225180 1828 ntBASIC21.18■□□□□ 0.98
Trim52Q8CDV4 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Trim52Q8CDV4 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Trim52Q8CDV4 Umpk-ps-201ENSMUST00000211897 827 ntBASIC21.18■□□□□ 0.98
Trim52Q8CDV4 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim52Q8CDV4 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim52Q8CDV4 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim52Q8CDV4 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim52Q8CDV4 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim52Q8CDV4 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim52Q8CDV4 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Trim52Q8CDV4 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Trim52Q8CDV4 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Trim52Q8CDV4 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim52Q8CDV4 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC21.17■□□□□ 0.98
Trim52Q8CDV4 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Trim52Q8CDV4 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim52Q8CDV4 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim52Q8CDV4 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim52Q8CDV4 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC21.17■□□□□ 0.98
Trim52Q8CDV4 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim52Q8CDV4 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Trim52Q8CDV4 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim52Q8CDV4 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim52Q8CDV4 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC21.16■□□□□ 0.98
Trim52Q8CDV4 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Trim52Q8CDV4 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim52Q8CDV4 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trim52Q8CDV4 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim52Q8CDV4 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim52Q8CDV4 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim52Q8CDV4 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Trim52Q8CDV4 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim52Q8CDV4 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim52Q8CDV4 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC21.15■□□□□ 0.98
Trim52Q8CDV4 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms