Protein–RNA interactions for Protein: Q8CDR2

Rsph6a, Radial spoke head protein 6 homolog A, mousemouse

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph6aQ8CDR2 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rsph6aQ8CDR2 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rsph6aQ8CDR2 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rsph6aQ8CDR2 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC22.36■■□□□ 1.17
Rsph6aQ8CDR2 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Rsph6aQ8CDR2 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rsph6aQ8CDR2 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Rsph6aQ8CDR2 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC22.36■■□□□ 1.17
Rsph6aQ8CDR2 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rsph6aQ8CDR2 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Rsph6aQ8CDR2 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Rsph6aQ8CDR2 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rsph6aQ8CDR2 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Rsph6aQ8CDR2 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rsph6aQ8CDR2 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC22.35■■□□□ 1.17
Rsph6aQ8CDR2 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Rsph6aQ8CDR2 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rsph6aQ8CDR2 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC22.35■■□□□ 1.17
Rsph6aQ8CDR2 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC22.35■■□□□ 1.17
Rsph6aQ8CDR2 Gm9103-201ENSMUST00000119371 405 ntBASIC22.35■■□□□ 1.17
Rsph6aQ8CDR2 Gm8969-201ENSMUST00000199694 526 ntBASIC22.35■■□□□ 1.17
Rsph6aQ8CDR2 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rsph6aQ8CDR2 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Rsph6aQ8CDR2 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Rsph6aQ8CDR2 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rsph6aQ8CDR2 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rsph6aQ8CDR2 Zcchc6-207ENSMUST00000225576 2499 ntBASIC22.35■■□□□ 1.17
Rsph6aQ8CDR2 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Rsph6aQ8CDR2 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC22.34■■□□□ 1.17
Rsph6aQ8CDR2 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Rsph6aQ8CDR2 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC22.34■■□□□ 1.17
Rsph6aQ8CDR2 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
Rsph6aQ8CDR2 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rsph6aQ8CDR2 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC22.34■■□□□ 1.17
Rsph6aQ8CDR2 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Rsph6aQ8CDR2 Gm13186-201ENSMUST00000118031 316 ntBASIC22.34■■□□□ 1.17
Rsph6aQ8CDR2 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Rsph6aQ8CDR2 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC22.34■■□□□ 1.17
Rsph6aQ8CDR2 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC22.34■■□□□ 1.17
Rsph6aQ8CDR2 AC130713.1-201ENSMUST00000228853 1096 ntBASIC22.34■■□□□ 1.17
Rsph6aQ8CDR2 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rsph6aQ8CDR2 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rsph6aQ8CDR2 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rsph6aQ8CDR2 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
Rsph6aQ8CDR2 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
Rsph6aQ8CDR2 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Rsph6aQ8CDR2 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC22.34■■□□□ 1.17
Rsph6aQ8CDR2 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Rsph6aQ8CDR2 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Rsph6aQ8CDR2 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Rsph6aQ8CDR2 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Rsph6aQ8CDR2 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Rsph6aQ8CDR2 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Rsph6aQ8CDR2 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Rsph6aQ8CDR2 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC22.33■■□□□ 1.17
Rsph6aQ8CDR2 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Rsph6aQ8CDR2 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Rsph6aQ8CDR2 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC22.33■■□□□ 1.17
Rsph6aQ8CDR2 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Rsph6aQ8CDR2 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Rsph6aQ8CDR2 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Rsph6aQ8CDR2 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
Rsph6aQ8CDR2 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
Rsph6aQ8CDR2 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Rsph6aQ8CDR2 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Rsph6aQ8CDR2 Cxcl14-202ENSMUST00000224801 1467 ntBASIC22.33■■□□□ 1.16
Rsph6aQ8CDR2 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Rsph6aQ8CDR2 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
Rsph6aQ8CDR2 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rsph6aQ8CDR2 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rsph6aQ8CDR2 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Rsph6aQ8CDR2 Gm6623-201ENSMUST00000173570 544 ntBASIC22.32■■□□□ 1.16
Rsph6aQ8CDR2 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rsph6aQ8CDR2 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rsph6aQ8CDR2 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
Rsph6aQ8CDR2 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC22.32■■□□□ 1.16
Rsph6aQ8CDR2 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Rsph6aQ8CDR2 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Rsph6aQ8CDR2 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Rsph6aQ8CDR2 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rsph6aQ8CDR2 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rsph6aQ8CDR2 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Rsph6aQ8CDR2 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC22.31■■□□□ 1.16
Rsph6aQ8CDR2 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rsph6aQ8CDR2 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rsph6aQ8CDR2 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rsph6aQ8CDR2 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rsph6aQ8CDR2 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rsph6aQ8CDR2 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Rsph6aQ8CDR2 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC22.31■■□□□ 1.16
Rsph6aQ8CDR2 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC22.31■■□□□ 1.16
Rsph6aQ8CDR2 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC22.31■■□□□ 1.16
Rsph6aQ8CDR2 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Rsph6aQ8CDR2 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rsph6aQ8CDR2 Wnt10b-204ENSMUST00000226655 1807 ntBASIC22.3■■□□□ 1.16
Rsph6aQ8CDR2 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Rsph6aQ8CDR2 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC22.3■■□□□ 1.16
Rsph6aQ8CDR2 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC22.3■■□□□ 1.16
Rsph6aQ8CDR2 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rsph6aQ8CDR2 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms