Protein–RNA interactions for Protein: Q8CCJ3

Ufl1, E3 UFM1-protein ligase 1, mousemouse

Known RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufl1Q8CCJ3 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ufl1Q8CCJ3 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ufl1Q8CCJ3 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ufl1Q8CCJ3 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Ufl1Q8CCJ3 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
Ufl1Q8CCJ3 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ufl1Q8CCJ3 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ufl1Q8CCJ3 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Ufl1Q8CCJ3 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ufl1Q8CCJ3 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
Ufl1Q8CCJ3 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ufl1Q8CCJ3 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ufl1Q8CCJ3 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ufl1Q8CCJ3 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ufl1Q8CCJ3 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ufl1Q8CCJ3 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ufl1Q8CCJ3 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.58■□□□□ 0.89
Ufl1Q8CCJ3 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ufl1Q8CCJ3 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Ufl1Q8CCJ3 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Ufl1Q8CCJ3 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Ufl1Q8CCJ3 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
Ufl1Q8CCJ3 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ufl1Q8CCJ3 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ufl1Q8CCJ3 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ufl1Q8CCJ3 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ufl1Q8CCJ3 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Ufl1Q8CCJ3 Ank2-226ENSMUST00000189368 339 ntBASIC20.57■□□□□ 0.88
Ufl1Q8CCJ3 Gm37722-201ENSMUST00000193757 208 ntBASIC20.57■□□□□ 0.88
Ufl1Q8CCJ3 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Ufl1Q8CCJ3 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ufl1Q8CCJ3 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ufl1Q8CCJ3 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.56■□□□□ 0.88
Ufl1Q8CCJ3 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ufl1Q8CCJ3 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ufl1Q8CCJ3 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC20.56■□□□□ 0.88
Ufl1Q8CCJ3 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ufl1Q8CCJ3 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ufl1Q8CCJ3 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Ufl1Q8CCJ3 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ufl1Q8CCJ3 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ufl1Q8CCJ3 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ufl1Q8CCJ3 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ufl1Q8CCJ3 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ufl1Q8CCJ3 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ufl1Q8CCJ3 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ufl1Q8CCJ3 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC20.55■□□□□ 0.88
Ufl1Q8CCJ3 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ufl1Q8CCJ3 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.55■□□□□ 0.88
Ufl1Q8CCJ3 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ufl1Q8CCJ3 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ufl1Q8CCJ3 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ufl1Q8CCJ3 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ufl1Q8CCJ3 Gm11860-201ENSMUST00000122346 1010 ntBASIC20.55■□□□□ 0.88
Ufl1Q8CCJ3 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC20.55■□□□□ 0.88
Ufl1Q8CCJ3 Gm27704-201ENSMUST00000185094 107 ntBASIC20.55■□□□□ 0.88
Ufl1Q8CCJ3 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Ufl1Q8CCJ3 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ufl1Q8CCJ3 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ufl1Q8CCJ3 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ufl1Q8CCJ3 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ufl1Q8CCJ3 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ufl1Q8CCJ3 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ufl1Q8CCJ3 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ufl1Q8CCJ3 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ufl1Q8CCJ3 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
Ufl1Q8CCJ3 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ufl1Q8CCJ3 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.54■□□□□ 0.88
Ufl1Q8CCJ3 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ufl1Q8CCJ3 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ufl1Q8CCJ3 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Ufl1Q8CCJ3 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ufl1Q8CCJ3 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.54■□□□□ 0.88
Ufl1Q8CCJ3 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ufl1Q8CCJ3 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ufl1Q8CCJ3 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ufl1Q8CCJ3 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ufl1Q8CCJ3 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ufl1Q8CCJ3 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ufl1Q8CCJ3 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ufl1Q8CCJ3 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ufl1Q8CCJ3 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Ufl1Q8CCJ3 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ufl1Q8CCJ3 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ufl1Q8CCJ3 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC20.53■□□□□ 0.88
Ufl1Q8CCJ3 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ufl1Q8CCJ3 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Ufl1Q8CCJ3 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ufl1Q8CCJ3 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ufl1Q8CCJ3 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ufl1Q8CCJ3 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Ufl1Q8CCJ3 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ufl1Q8CCJ3 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ufl1Q8CCJ3 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ufl1Q8CCJ3 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
Ufl1Q8CCJ3 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Ufl1Q8CCJ3 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC20.52■□□□□ 0.88
Ufl1Q8CCJ3 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ufl1Q8CCJ3 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ufl1Q8CCJ3 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms