Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ptcd1Q8C2E4 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ptcd1Q8C2E4 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC21.09■□□□□ 0.97
Ptcd1Q8C2E4 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ptcd1Q8C2E4 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ptcd1Q8C2E4 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ptcd1Q8C2E4 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ptcd1Q8C2E4 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ptcd1Q8C2E4 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ptcd1Q8C2E4 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ptcd1Q8C2E4 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ptcd1Q8C2E4 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ptcd1Q8C2E4 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Ptcd1Q8C2E4 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC21.08■□□□□ 0.97
Ptcd1Q8C2E4 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC21.08■□□□□ 0.97
Ptcd1Q8C2E4 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ptcd1Q8C2E4 Mir8098-201ENSMUST00000184011 137 ntBASIC21.08■□□□□ 0.97
Ptcd1Q8C2E4 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ptcd1Q8C2E4 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ptcd1Q8C2E4 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ptcd1Q8C2E4 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ptcd1Q8C2E4 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ptcd1Q8C2E4 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ptcd1Q8C2E4 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ptcd1Q8C2E4 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ptcd1Q8C2E4 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ptcd1Q8C2E4 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ptcd1Q8C2E4 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ptcd1Q8C2E4 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ptcd1Q8C2E4 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ptcd1Q8C2E4 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ptcd1Q8C2E4 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Ptcd1Q8C2E4 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ptcd1Q8C2E4 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ptcd1Q8C2E4 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ptcd1Q8C2E4 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Ptcd1Q8C2E4 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ptcd1Q8C2E4 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC21.07■□□□□ 0.96
Ptcd1Q8C2E4 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ptcd1Q8C2E4 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Ptcd1Q8C2E4 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ptcd1Q8C2E4 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC21.07■□□□□ 0.96
Ptcd1Q8C2E4 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC21.07■□□□□ 0.96
Ptcd1Q8C2E4 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Ptcd1Q8C2E4 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ptcd1Q8C2E4 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Ptcd1Q8C2E4 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC21.07■□□□□ 0.96
Ptcd1Q8C2E4 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Ptcd1Q8C2E4 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ptcd1Q8C2E4 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ptcd1Q8C2E4 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ptcd1Q8C2E4 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ptcd1Q8C2E4 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ptcd1Q8C2E4 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ptcd1Q8C2E4 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ptcd1Q8C2E4 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Ptcd1Q8C2E4 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ptcd1Q8C2E4 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ptcd1Q8C2E4 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ptcd1Q8C2E4 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ptcd1Q8C2E4 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ptcd1Q8C2E4 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ptcd1Q8C2E4 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ptcd1Q8C2E4 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC21.06■□□□□ 0.96
Ptcd1Q8C2E4 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC21.06■□□□□ 0.96
Ptcd1Q8C2E4 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ptcd1Q8C2E4 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ptcd1Q8C2E4 Idnk-204ENSMUST00000226010 1898 ntBASIC21.06■□□□□ 0.96
Ptcd1Q8C2E4 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Ptcd1Q8C2E4 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ptcd1Q8C2E4 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ptcd1Q8C2E4 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ptcd1Q8C2E4 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ptcd1Q8C2E4 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ptcd1Q8C2E4 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ptcd1Q8C2E4 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ptcd1Q8C2E4 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ptcd1Q8C2E4 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ptcd1Q8C2E4 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ptcd1Q8C2E4 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ptcd1Q8C2E4 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC21.05■□□□□ 0.96
Ptcd1Q8C2E4 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ptcd1Q8C2E4 Gm13884-201ENSMUST00000118103 829 ntBASIC21.05■□□□□ 0.96
Ptcd1Q8C2E4 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ptcd1Q8C2E4 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ptcd1Q8C2E4 Gm29791-202ENSMUST00000207888 369 ntBASIC21.05■□□□□ 0.96
Ptcd1Q8C2E4 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC21.05■□□□□ 0.96
Ptcd1Q8C2E4 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ptcd1Q8C2E4 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ptcd1Q8C2E4 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ptcd1Q8C2E4 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ptcd1Q8C2E4 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Ptcd1Q8C2E4 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ptcd1Q8C2E4 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ptcd1Q8C2E4 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ptcd1Q8C2E4 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ptcd1Q8C2E4 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC21.04■□□□□ 0.96
Ptcd1Q8C2E4 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ptcd1Q8C2E4 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC21.04■□□□□ 0.96
Ptcd1Q8C2E4 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms