Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ska3Q8C263 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Ska3Q8C263 Gm37055-201ENSMUST00000191866 133 ntBASIC16.13■□□□□ 0.17
Ska3Q8C263 Gm37025-201ENSMUST00000195159 829 ntBASIC16.13■□□□□ 0.17
Ska3Q8C263 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.13■□□□□ 0.17
Ska3Q8C263 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.13■□□□□ 0.17
Ska3Q8C263 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ska3Q8C263 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Ska3Q8C263 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ska3Q8C263 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ska3Q8C263 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ska3Q8C263 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ska3Q8C263 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Ska3Q8C263 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ska3Q8C263 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ska3Q8C263 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ska3Q8C263 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ska3Q8C263 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ska3Q8C263 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Ska3Q8C263 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ska3Q8C263 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ska3Q8C263 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ska3Q8C263 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.12■□□□□ 0.17
Ska3Q8C263 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.12■□□□□ 0.17
Ska3Q8C263 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.12■□□□□ 0.17
Ska3Q8C263 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ska3Q8C263 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ska3Q8C263 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.12■□□□□ 0.17
Ska3Q8C263 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ska3Q8C263 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ska3Q8C263 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ska3Q8C263 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Ska3Q8C263 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Ska3Q8C263 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.12■□□□□ 0.17
Ska3Q8C263 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ska3Q8C263 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.12■□□□□ 0.17
Ska3Q8C263 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Ska3Q8C263 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.12■□□□□ 0.17
Ska3Q8C263 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ska3Q8C263 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.11■□□□□ 0.17
Ska3Q8C263 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ska3Q8C263 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ska3Q8C263 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.11■□□□□ 0.17
Ska3Q8C263 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.11■□□□□ 0.17
Ska3Q8C263 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ska3Q8C263 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ska3Q8C263 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ska3Q8C263 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ska3Q8C263 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Ska3Q8C263 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ska3Q8C263 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Ska3Q8C263 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.11■□□□□ 0.17
Ska3Q8C263 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.11■□□□□ 0.17
Ska3Q8C263 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ska3Q8C263 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ska3Q8C263 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ska3Q8C263 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ska3Q8C263 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ska3Q8C263 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ska3Q8C263 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ska3Q8C263 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ska3Q8C263 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ska3Q8C263 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ska3Q8C263 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Ska3Q8C263 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ska3Q8C263 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ska3Q8C263 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Ska3Q8C263 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ska3Q8C263 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ska3Q8C263 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ska3Q8C263 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ska3Q8C263 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ska3Q8C263 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.1■□□□□ 0.17
Ska3Q8C263 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.1■□□□□ 0.17
Ska3Q8C263 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.1■□□□□ 0.17
Ska3Q8C263 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ska3Q8C263 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.1■□□□□ 0.17
Ska3Q8C263 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ska3Q8C263 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ska3Q8C263 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ska3Q8C263 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ska3Q8C263 Gm5417-201ENSMUST00000079706 384 ntBASIC16.1■□□□□ 0.17
Ska3Q8C263 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ska3Q8C263 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ska3Q8C263 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ska3Q8C263 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ska3Q8C263 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.09■□□□□ 0.17
Ska3Q8C263 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ska3Q8C263 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ska3Q8C263 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ska3Q8C263 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ska3Q8C263 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ska3Q8C263 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ska3Q8C263 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ska3Q8C263 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ska3Q8C263 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.09■□□□□ 0.17
Ska3Q8C263 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.09■□□□□ 0.17
Ska3Q8C263 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ska3Q8C263 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ska3Q8C263 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms