Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim47Q8C0E3 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Trim47Q8C0E3 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
Trim47Q8C0E3 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC19.01■□□□□ 0.63
Trim47Q8C0E3 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim47Q8C0E3 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim47Q8C0E3 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim47Q8C0E3 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim47Q8C0E3 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim47Q8C0E3 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Trim47Q8C0E3 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim47Q8C0E3 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC19.01■□□□□ 0.63
Trim47Q8C0E3 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim47Q8C0E3 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Trim47Q8C0E3 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trim47Q8C0E3 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim47Q8C0E3 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim47Q8C0E3 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim47Q8C0E3 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Trim47Q8C0E3 Gm13474-201ENSMUST00000122466 815 ntBASIC19■□□□□ 0.63
Trim47Q8C0E3 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim47Q8C0E3 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim47Q8C0E3 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Trim47Q8C0E3 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Trim47Q8C0E3 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trim47Q8C0E3 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim47Q8C0E3 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trim47Q8C0E3 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim47Q8C0E3 Gm45606-201ENSMUST00000209836 2795 ntBASIC19■□□□□ 0.63
Trim47Q8C0E3 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Trim47Q8C0E3 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Trim47Q8C0E3 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim47Q8C0E3 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim47Q8C0E3 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim47Q8C0E3 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim47Q8C0E3 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Trim47Q8C0E3 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim47Q8C0E3 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.99■□□□□ 0.63
Trim47Q8C0E3 Gm6659-201ENSMUST00000174752 547 ntBASIC18.99■□□□□ 0.63
Trim47Q8C0E3 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim47Q8C0E3 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim47Q8C0E3 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim47Q8C0E3 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim47Q8C0E3 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim47Q8C0E3 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim47Q8C0E3 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim47Q8C0E3 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim47Q8C0E3 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim47Q8C0E3 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Trim47Q8C0E3 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trim47Q8C0E3 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim47Q8C0E3 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
Trim47Q8C0E3 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim47Q8C0E3 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trim47Q8C0E3 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim47Q8C0E3 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim47Q8C0E3 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim47Q8C0E3 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Trim47Q8C0E3 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim47Q8C0E3 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim47Q8C0E3 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim47Q8C0E3 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim47Q8C0E3 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim47Q8C0E3 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim47Q8C0E3 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Trim47Q8C0E3 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim47Q8C0E3 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
Trim47Q8C0E3 Gm22697-201ENSMUST00000175194 63 ntBASIC18.97■□□□□ 0.63
Trim47Q8C0E3 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
Trim47Q8C0E3 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim47Q8C0E3 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim47Q8C0E3 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim47Q8C0E3 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Trim47Q8C0E3 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim47Q8C0E3 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trim47Q8C0E3 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Trim47Q8C0E3 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim47Q8C0E3 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim47Q8C0E3 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim47Q8C0E3 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim47Q8C0E3 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim47Q8C0E3 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.96■□□□□ 0.63
Trim47Q8C0E3 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.96■□□□□ 0.63
Trim47Q8C0E3 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.96■□□□□ 0.63
Trim47Q8C0E3 Gm7213-201ENSMUST00000215977 950 ntBASIC18.96■□□□□ 0.63
Trim47Q8C0E3 Gm10566-201ENSMUST00000086739 996 ntBASIC18.96■□□□□ 0.63
Trim47Q8C0E3 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.96■□□□□ 0.63
Trim47Q8C0E3 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trim47Q8C0E3 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim47Q8C0E3 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim47Q8C0E3 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.96■□□□□ 0.63
Trim47Q8C0E3 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim47Q8C0E3 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim47Q8C0E3 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trim47Q8C0E3 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim47Q8C0E3 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim47Q8C0E3 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim47Q8C0E3 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim47Q8C0E3 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trim47Q8C0E3 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms