Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sh3rf2Q8BZT2 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sh3rf2Q8BZT2 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sh3rf2Q8BZT2 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Sh3rf2Q8BZT2 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sh3rf2Q8BZT2 Actl10-202ENSMUST00000226583 1501 ntBASIC17.41■□□□□ 0.38
Sh3rf2Q8BZT2 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sh3rf2Q8BZT2 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sh3rf2Q8BZT2 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sh3rf2Q8BZT2 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sh3rf2Q8BZT2 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sh3rf2Q8BZT2 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sh3rf2Q8BZT2 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sh3rf2Q8BZT2 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sh3rf2Q8BZT2 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Sh3rf2Q8BZT2 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sh3rf2Q8BZT2 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Sh3rf2Q8BZT2 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sh3rf2Q8BZT2 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sh3rf2Q8BZT2 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.4■□□□□ 0.38
Sh3rf2Q8BZT2 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sh3rf2Q8BZT2 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sh3rf2Q8BZT2 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.4■□□□□ 0.38
Sh3rf2Q8BZT2 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sh3rf2Q8BZT2 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sh3rf2Q8BZT2 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sh3rf2Q8BZT2 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sh3rf2Q8BZT2 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sh3rf2Q8BZT2 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sh3rf2Q8BZT2 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sh3rf2Q8BZT2 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sh3rf2Q8BZT2 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.4■□□□□ 0.38
Sh3rf2Q8BZT2 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sh3rf2Q8BZT2 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.4■□□□□ 0.38
Sh3rf2Q8BZT2 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.39■□□□□ 0.38
Sh3rf2Q8BZT2 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
Sh3rf2Q8BZT2 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sh3rf2Q8BZT2 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Sh3rf2Q8BZT2 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sh3rf2Q8BZT2 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sh3rf2Q8BZT2 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.39■□□□□ 0.37
Sh3rf2Q8BZT2 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.39■□□□□ 0.37
Sh3rf2Q8BZT2 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Sh3rf2Q8BZT2 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sh3rf2Q8BZT2 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sh3rf2Q8BZT2 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.39■□□□□ 0.37
Sh3rf2Q8BZT2 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sh3rf2Q8BZT2 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sh3rf2Q8BZT2 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sh3rf2Q8BZT2 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sh3rf2Q8BZT2 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sh3rf2Q8BZT2 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.38■□□□□ 0.37
Sh3rf2Q8BZT2 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sh3rf2Q8BZT2 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Sh3rf2Q8BZT2 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sh3rf2Q8BZT2 Gm29518-201ENSMUST00000190858 372 ntBASIC17.38■□□□□ 0.37
Sh3rf2Q8BZT2 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
Sh3rf2Q8BZT2 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sh3rf2Q8BZT2 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sh3rf2Q8BZT2 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sh3rf2Q8BZT2 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sh3rf2Q8BZT2 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.38■□□□□ 0.37
Sh3rf2Q8BZT2 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sh3rf2Q8BZT2 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.38■□□□□ 0.37
Sh3rf2Q8BZT2 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sh3rf2Q8BZT2 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.38■□□□□ 0.37
Sh3rf2Q8BZT2 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh3rf2Q8BZT2 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh3rf2Q8BZT2 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Sh3rf2Q8BZT2 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh3rf2Q8BZT2 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh3rf2Q8BZT2 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.37■□□□□ 0.37
Sh3rf2Q8BZT2 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Sh3rf2Q8BZT2 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
Sh3rf2Q8BZT2 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh3rf2Q8BZT2 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh3rf2Q8BZT2 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Sh3rf2Q8BZT2 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sh3rf2Q8BZT2 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Sh3rf2Q8BZT2 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh3rf2Q8BZT2 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh3rf2Q8BZT2 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh3rf2Q8BZT2 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Sh3rf2Q8BZT2 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh3rf2Q8BZT2 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh3rf2Q8BZT2 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Sh3rf2Q8BZT2 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh3rf2Q8BZT2 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sh3rf2Q8BZT2 Gm17808-201ENSMUST00000200859 894 ntBASIC17.36■□□□□ 0.37
Sh3rf2Q8BZT2 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sh3rf2Q8BZT2 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh3rf2Q8BZT2 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh3rf2Q8BZT2 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sh3rf2Q8BZT2 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh3rf2Q8BZT2 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh3rf2Q8BZT2 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh3rf2Q8BZT2 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh3rf2Q8BZT2 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Sh3rf2Q8BZT2 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sh3rf2Q8BZT2 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms