Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Usp40Q8BWR4 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Usp40Q8BWR4 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC23.55■■□□□ 1.36
Usp40Q8BWR4 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Usp40Q8BWR4 Olfr129-201ENSMUST00000122318 993 ntBASIC23.55■■□□□ 1.36
Usp40Q8BWR4 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC23.55■■□□□ 1.36
Usp40Q8BWR4 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Usp40Q8BWR4 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
Usp40Q8BWR4 Gm27357-201ENSMUST00000183754 135 ntBASIC23.55■■□□□ 1.36
Usp40Q8BWR4 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Usp40Q8BWR4 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Usp40Q8BWR4 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Usp40Q8BWR4 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Usp40Q8BWR4 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Usp40Q8BWR4 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Usp40Q8BWR4 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Usp40Q8BWR4 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Usp40Q8BWR4 Gm45328-201ENSMUST00000210942 917 ntBASIC23.54■■□□□ 1.36
Usp40Q8BWR4 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Usp40Q8BWR4 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Usp40Q8BWR4 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
Usp40Q8BWR4 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
Usp40Q8BWR4 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Usp40Q8BWR4 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
Usp40Q8BWR4 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Usp40Q8BWR4 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC23.53■■□□□ 1.36
Usp40Q8BWR4 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Usp40Q8BWR4 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC23.53■■□□□ 1.36
Usp40Q8BWR4 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
Usp40Q8BWR4 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC23.53■■□□□ 1.36
Usp40Q8BWR4 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Usp40Q8BWR4 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Usp40Q8BWR4 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Usp40Q8BWR4 Phf7-203ENSMUST00000226565 1971 ntBASIC23.53■■□□□ 1.36
Usp40Q8BWR4 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC23.53■■□□□ 1.36
Usp40Q8BWR4 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
Usp40Q8BWR4 Gm11336-201ENSMUST00000118168 334 ntBASIC23.53■■□□□ 1.36
Usp40Q8BWR4 Mir3081-201ENSMUST00000175305 84 ntBASIC23.53■■□□□ 1.36
Usp40Q8BWR4 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Usp40Q8BWR4 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Usp40Q8BWR4 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Usp40Q8BWR4 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Usp40Q8BWR4 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Usp40Q8BWR4 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Usp40Q8BWR4 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Usp40Q8BWR4 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Usp40Q8BWR4 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Usp40Q8BWR4 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Usp40Q8BWR4 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Usp40Q8BWR4 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Usp40Q8BWR4 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Usp40Q8BWR4 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC23.52■■□□□ 1.36
Usp40Q8BWR4 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Usp40Q8BWR4 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Usp40Q8BWR4 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Usp40Q8BWR4 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Usp40Q8BWR4 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
Usp40Q8BWR4 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.35
Usp40Q8BWR4 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Usp40Q8BWR4 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Usp40Q8BWR4 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
Usp40Q8BWR4 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
Usp40Q8BWR4 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC23.51■■□□□ 1.35
Usp40Q8BWR4 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Usp40Q8BWR4 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC23.51■■□□□ 1.35
Usp40Q8BWR4 Wnt10b-204ENSMUST00000226655 1807 ntBASIC23.51■■□□□ 1.35
Usp40Q8BWR4 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Usp40Q8BWR4 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Usp40Q8BWR4 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Usp40Q8BWR4 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Usp40Q8BWR4 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Usp40Q8BWR4 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Usp40Q8BWR4 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Usp40Q8BWR4 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Usp40Q8BWR4 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Usp40Q8BWR4 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Usp40Q8BWR4 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Usp40Q8BWR4 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Usp40Q8BWR4 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Usp40Q8BWR4 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Usp40Q8BWR4 Gm15794-201ENSMUST00000120182 631 ntBASIC23.49■■□□□ 1.35
Usp40Q8BWR4 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Usp40Q8BWR4 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Usp40Q8BWR4 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Usp40Q8BWR4 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Usp40Q8BWR4 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
Usp40Q8BWR4 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Usp40Q8BWR4 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
Usp40Q8BWR4 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Usp40Q8BWR4 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Usp40Q8BWR4 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
Usp40Q8BWR4 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC23.48■■□□□ 1.35
Usp40Q8BWR4 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC23.48■■□□□ 1.35
Usp40Q8BWR4 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Usp40Q8BWR4 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Usp40Q8BWR4 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC23.48■■□□□ 1.35
Usp40Q8BWR4 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Usp40Q8BWR4 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC23.48■■□□□ 1.35
Usp40Q8BWR4 Gm42939-201ENSMUST00000197514 2205 ntBASIC23.48■■□□□ 1.35
Usp40Q8BWR4 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 155.6 ms