Protein–RNA interactions for Protein: Q8BVF7

Aph1a, Gamma-secretase subunit APH-1A, mousemouse

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1aQ8BVF7 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Aph1aQ8BVF7 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Aph1aQ8BVF7 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Aph1aQ8BVF7 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Aph1aQ8BVF7 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Aph1aQ8BVF7 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Aph1aQ8BVF7 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Aph1aQ8BVF7 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Aph1aQ8BVF7 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Aph1aQ8BVF7 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Aph1aQ8BVF7 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC15.16■□□□□ 0.02
Aph1aQ8BVF7 Gm11539-201ENSMUST00000119837 557 ntBASIC15.16■□□□□ 0.02
Aph1aQ8BVF7 Gm13436-201ENSMUST00000120418 567 ntBASIC15.16■□□□□ 0.02
Aph1aQ8BVF7 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Aph1aQ8BVF7 Gm43799-201ENSMUST00000201845 579 ntBASIC15.16■□□□□ 0.02
Aph1aQ8BVF7 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Aph1aQ8BVF7 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Aph1aQ8BVF7 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Aph1aQ8BVF7 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Aph1aQ8BVF7 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Aph1aQ8BVF7 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Aph1aQ8BVF7 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Aph1aQ8BVF7 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Aph1aQ8BVF7 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Aph1aQ8BVF7 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
Aph1aQ8BVF7 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Aph1aQ8BVF7 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Aph1aQ8BVF7 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Aph1aQ8BVF7 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Aph1aQ8BVF7 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Aph1aQ8BVF7 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Aph1aQ8BVF7 Gm17661-201ENSMUST00000170317 270 ntBASIC15.15■□□□□ 0.02
Aph1aQ8BVF7 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Aph1aQ8BVF7 Gm43353-201ENSMUST00000199224 1295 ntBASIC15.15■□□□□ 0.02
Aph1aQ8BVF7 AC159205.6-201ENSMUST00000224935 887 ntBASIC15.15■□□□□ 0.02
Aph1aQ8BVF7 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Aph1aQ8BVF7 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Aph1aQ8BVF7 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Aph1aQ8BVF7 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Aph1aQ8BVF7 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Aph1aQ8BVF7 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC15.15■□□□□ 0.02
Aph1aQ8BVF7 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Aph1aQ8BVF7 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Aph1aQ8BVF7 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Aph1aQ8BVF7 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15.14■□□□□ 0.01
Aph1aQ8BVF7 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Aph1aQ8BVF7 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Aph1aQ8BVF7 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Aph1aQ8BVF7 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC15.14■□□□□ 0.01
Aph1aQ8BVF7 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Aph1aQ8BVF7 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Aph1aQ8BVF7 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Aph1aQ8BVF7 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Aph1aQ8BVF7 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Aph1aQ8BVF7 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.14■□□□□ 0.01
Aph1aQ8BVF7 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Aph1aQ8BVF7 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Aph1aQ8BVF7 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Aph1aQ8BVF7 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Aph1aQ8BVF7 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Aph1aQ8BVF7 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Aph1aQ8BVF7 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Aph1aQ8BVF7 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.13■□□□□ 0.01
Aph1aQ8BVF7 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Aph1aQ8BVF7 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Aph1aQ8BVF7 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Aph1aQ8BVF7 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Aph1aQ8BVF7 Gm13559-201ENSMUST00000120476 863 ntBASIC15.13■□□□□ 0.01
Aph1aQ8BVF7 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC15.13■□□□□ 0.01
Aph1aQ8BVF7 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Aph1aQ8BVF7 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.13■□□□□ 0.01
Aph1aQ8BVF7 Gm7791-201ENSMUST00000219066 539 ntBASIC15.13■□□□□ 0.01
Aph1aQ8BVF7 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Aph1aQ8BVF7 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Aph1aQ8BVF7 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Aph1aQ8BVF7 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.13■□□□□ 0.01
Aph1aQ8BVF7 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Aph1aQ8BVF7 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Aph1aQ8BVF7 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.13■□□□□ 0.01
Aph1aQ8BVF7 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Aph1aQ8BVF7 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Aph1aQ8BVF7 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC15.12■□□□□ 0.01
Aph1aQ8BVF7 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC15.12■□□□□ 0.01
Aph1aQ8BVF7 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Aph1aQ8BVF7 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Aph1aQ8BVF7 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Aph1aQ8BVF7 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Aph1aQ8BVF7 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Aph1aQ8BVF7 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.12■□□□□ 0.01
Aph1aQ8BVF7 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Aph1aQ8BVF7 Gm6433-201ENSMUST00000118634 875 ntBASIC15.12■□□□□ 0.01
Aph1aQ8BVF7 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Aph1aQ8BVF7 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Aph1aQ8BVF7 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.12■□□□□ 0.01
Aph1aQ8BVF7 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Aph1aQ8BVF7 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Aph1aQ8BVF7 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Aph1aQ8BVF7 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Aph1aQ8BVF7 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Aph1aQ8BVF7 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms