Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpsf7Q8BTV2 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpsf7Q8BTV2 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cpsf7Q8BTV2 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpsf7Q8BTV2 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
Cpsf7Q8BTV2 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpsf7Q8BTV2 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.18■□□□□ 0.34
Cpsf7Q8BTV2 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cpsf7Q8BTV2 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.18■□□□□ 0.34
Cpsf7Q8BTV2 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Cpsf7Q8BTV2 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpsf7Q8BTV2 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cpsf7Q8BTV2 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpsf7Q8BTV2 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpsf7Q8BTV2 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpsf7Q8BTV2 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpsf7Q8BTV2 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cpsf7Q8BTV2 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cpsf7Q8BTV2 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.17■□□□□ 0.34
Cpsf7Q8BTV2 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cpsf7Q8BTV2 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cpsf7Q8BTV2 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cpsf7Q8BTV2 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cpsf7Q8BTV2 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cpsf7Q8BTV2 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cpsf7Q8BTV2 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.17■□□□□ 0.34
Cpsf7Q8BTV2 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cpsf7Q8BTV2 Mir5133-201ENSMUST00000174955 77 ntBASIC17.17■□□□□ 0.34
Cpsf7Q8BTV2 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.17■□□□□ 0.34
Cpsf7Q8BTV2 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.17■□□□□ 0.34
Cpsf7Q8BTV2 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cpsf7Q8BTV2 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cpsf7Q8BTV2 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cpsf7Q8BTV2 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cpsf7Q8BTV2 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cpsf7Q8BTV2 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.17■□□□□ 0.34
Cpsf7Q8BTV2 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cpsf7Q8BTV2 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cpsf7Q8BTV2 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.17■□□□□ 0.34
Cpsf7Q8BTV2 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cpsf7Q8BTV2 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Cpsf7Q8BTV2 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cpsf7Q8BTV2 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cpsf7Q8BTV2 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Cpsf7Q8BTV2 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Cpsf7Q8BTV2 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cpsf7Q8BTV2 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
Cpsf7Q8BTV2 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cpsf7Q8BTV2 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cpsf7Q8BTV2 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cpsf7Q8BTV2 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cpsf7Q8BTV2 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.16■□□□□ 0.34
Cpsf7Q8BTV2 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cpsf7Q8BTV2 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cpsf7Q8BTV2 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cpsf7Q8BTV2 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cpsf7Q8BTV2 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cpsf7Q8BTV2 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cpsf7Q8BTV2 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cpsf7Q8BTV2 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cpsf7Q8BTV2 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.15■□□□□ 0.34
Cpsf7Q8BTV2 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cpsf7Q8BTV2 Gm27011-201ENSMUST00000182352 972 ntBASIC17.15■□□□□ 0.34
Cpsf7Q8BTV2 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cpsf7Q8BTV2 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cpsf7Q8BTV2 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cpsf7Q8BTV2 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cpsf7Q8BTV2 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cpsf7Q8BTV2 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Cpsf7Q8BTV2 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cpsf7Q8BTV2 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cpsf7Q8BTV2 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cpsf7Q8BTV2 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cpsf7Q8BTV2 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cpsf7Q8BTV2 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cpsf7Q8BTV2 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cpsf7Q8BTV2 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cpsf7Q8BTV2 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cpsf7Q8BTV2 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cpsf7Q8BTV2 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cpsf7Q8BTV2 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cpsf7Q8BTV2 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cpsf7Q8BTV2 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.14■□□□□ 0.33
Cpsf7Q8BTV2 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.14■□□□□ 0.33
Cpsf7Q8BTV2 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cpsf7Q8BTV2 Gm6365-201ENSMUST00000054711 744 ntBASIC17.14■□□□□ 0.33
Cpsf7Q8BTV2 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cpsf7Q8BTV2 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Cpsf7Q8BTV2 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cpsf7Q8BTV2 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
Cpsf7Q8BTV2 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.14■□□□□ 0.33
Cpsf7Q8BTV2 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cpsf7Q8BTV2 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Cpsf7Q8BTV2 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cpsf7Q8BTV2 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cpsf7Q8BTV2 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cpsf7Q8BTV2 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cpsf7Q8BTV2 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cpsf7Q8BTV2 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cpsf7Q8BTV2 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms