Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cpne3Q8BT60 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Cpne3Q8BT60 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cpne3Q8BT60 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cpne3Q8BT60 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cpne3Q8BT60 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Cpne3Q8BT60 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cpne3Q8BT60 Gm15375-201ENSMUST00000119510 849 ntBASIC16.6■□□□□ 0.25
Cpne3Q8BT60 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.6■□□□□ 0.25
Cpne3Q8BT60 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cpne3Q8BT60 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cpne3Q8BT60 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cpne3Q8BT60 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Cpne3Q8BT60 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cpne3Q8BT60 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Cpne3Q8BT60 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cpne3Q8BT60 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cpne3Q8BT60 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cpne3Q8BT60 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cpne3Q8BT60 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cpne3Q8BT60 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cpne3Q8BT60 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cpne3Q8BT60 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.59■□□□□ 0.25
Cpne3Q8BT60 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cpne3Q8BT60 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cpne3Q8BT60 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Cpne3Q8BT60 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cpne3Q8BT60 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cpne3Q8BT60 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cpne3Q8BT60 Gm11249-201ENSMUST00000117071 859 ntBASIC16.59■□□□□ 0.25
Cpne3Q8BT60 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
Cpne3Q8BT60 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cpne3Q8BT60 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.59■□□□□ 0.25
Cpne3Q8BT60 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Cpne3Q8BT60 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Cpne3Q8BT60 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cpne3Q8BT60 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Cpne3Q8BT60 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Cpne3Q8BT60 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cpne3Q8BT60 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Cpne3Q8BT60 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.58■□□□□ 0.24
Cpne3Q8BT60 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cpne3Q8BT60 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cpne3Q8BT60 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.58■□□□□ 0.24
Cpne3Q8BT60 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
Cpne3Q8BT60 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Cpne3Q8BT60 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cpne3Q8BT60 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cpne3Q8BT60 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cpne3Q8BT60 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cpne3Q8BT60 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.58■□□□□ 0.24
Cpne3Q8BT60 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cpne3Q8BT60 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Cpne3Q8BT60 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cpne3Q8BT60 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cpne3Q8BT60 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Cpne3Q8BT60 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Cpne3Q8BT60 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cpne3Q8BT60 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cpne3Q8BT60 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.57■□□□□ 0.24
Cpne3Q8BT60 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Cpne3Q8BT60 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cpne3Q8BT60 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.57■□□□□ 0.24
Cpne3Q8BT60 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.57■□□□□ 0.24
Cpne3Q8BT60 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cpne3Q8BT60 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.57■□□□□ 0.24
Cpne3Q8BT60 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cpne3Q8BT60 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cpne3Q8BT60 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cpne3Q8BT60 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Cpne3Q8BT60 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cpne3Q8BT60 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cpne3Q8BT60 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cpne3Q8BT60 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Cpne3Q8BT60 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cpne3Q8BT60 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cpne3Q8BT60 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cpne3Q8BT60 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.56■□□□□ 0.24
Cpne3Q8BT60 Gm11643-201ENSMUST00000119578 864 ntBASIC16.56■□□□□ 0.24
Cpne3Q8BT60 Gm27275-201ENSMUST00000184318 272 ntBASIC16.56■□□□□ 0.24
Cpne3Q8BT60 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Cpne3Q8BT60 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cpne3Q8BT60 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cpne3Q8BT60 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cpne3Q8BT60 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cpne3Q8BT60 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cpne3Q8BT60 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cpne3Q8BT60 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Cpne3Q8BT60 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cpne3Q8BT60 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cpne3Q8BT60 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Cpne3Q8BT60 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cpne3Q8BT60 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cpne3Q8BT60 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cpne3Q8BT60 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cpne3Q8BT60 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cpne3Q8BT60 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
Cpne3Q8BT60 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cpne3Q8BT60 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.55■□□□□ 0.24
Cpne3Q8BT60 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms