Protein–RNA interactions for Protein: Q8BSM7

Slc43a1, Large neutral amino acids transporter small subunit 3, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc43a1Q8BSM7 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Slc43a1Q8BSM7 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc43a1Q8BSM7 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc43a1Q8BSM7 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Slc43a1Q8BSM7 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc43a1Q8BSM7 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc43a1Q8BSM7 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Slc43a1Q8BSM7 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.32■□□□□ 0.36
Slc43a1Q8BSM7 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.32■□□□□ 0.36
Slc43a1Q8BSM7 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc43a1Q8BSM7 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Slc43a1Q8BSM7 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc43a1Q8BSM7 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc43a1Q8BSM7 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc43a1Q8BSM7 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc43a1Q8BSM7 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Slc43a1Q8BSM7 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc43a1Q8BSM7 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc43a1Q8BSM7 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Slc43a1Q8BSM7 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Slc43a1Q8BSM7 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Slc43a1Q8BSM7 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.31■□□□□ 0.36
Slc43a1Q8BSM7 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc43a1Q8BSM7 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc43a1Q8BSM7 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Slc43a1Q8BSM7 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Slc43a1Q8BSM7 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc43a1Q8BSM7 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc43a1Q8BSM7 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc43a1Q8BSM7 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Slc43a1Q8BSM7 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.31■□□□□ 0.36
Slc43a1Q8BSM7 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.31■□□□□ 0.36
Slc43a1Q8BSM7 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc43a1Q8BSM7 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Slc43a1Q8BSM7 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.31■□□□□ 0.36
Slc43a1Q8BSM7 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc43a1Q8BSM7 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Slc43a1Q8BSM7 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.31■□□□□ 0.36
Slc43a1Q8BSM7 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.31■□□□□ 0.36
Slc43a1Q8BSM7 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc43a1Q8BSM7 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Slc43a1Q8BSM7 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Slc43a1Q8BSM7 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc43a1Q8BSM7 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Slc43a1Q8BSM7 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc43a1Q8BSM7 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.3■□□□□ 0.36
Slc43a1Q8BSM7 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc43a1Q8BSM7 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc43a1Q8BSM7 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Slc43a1Q8BSM7 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Slc43a1Q8BSM7 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.3■□□□□ 0.36
Slc43a1Q8BSM7 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.3■□□□□ 0.36
Slc43a1Q8BSM7 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.3■□□□□ 0.36
Slc43a1Q8BSM7 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc43a1Q8BSM7 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc43a1Q8BSM7 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc43a1Q8BSM7 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc43a1Q8BSM7 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc43a1Q8BSM7 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc43a1Q8BSM7 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc43a1Q8BSM7 Gm11950-201ENSMUST00000121615 838 ntBASIC17.29■□□□□ 0.36
Slc43a1Q8BSM7 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Slc43a1Q8BSM7 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc43a1Q8BSM7 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc43a1Q8BSM7 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Slc43a1Q8BSM7 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc43a1Q8BSM7 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Slc43a1Q8BSM7 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc43a1Q8BSM7 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc43a1Q8BSM7 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc43a1Q8BSM7 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc43a1Q8BSM7 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.29■□□□□ 0.36
Slc43a1Q8BSM7 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Slc43a1Q8BSM7 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Slc43a1Q8BSM7 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc43a1Q8BSM7 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc43a1Q8BSM7 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Slc43a1Q8BSM7 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Slc43a1Q8BSM7 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Slc43a1Q8BSM7 Gm6623-201ENSMUST00000173570 544 ntBASIC17.28■□□□□ 0.36
Slc43a1Q8BSM7 Gm37722-201ENSMUST00000193757 208 ntBASIC17.28■□□□□ 0.36
Slc43a1Q8BSM7 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.28■□□□□ 0.36
Slc43a1Q8BSM7 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.28■□□□□ 0.36
Slc43a1Q8BSM7 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc43a1Q8BSM7 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Slc43a1Q8BSM7 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc43a1Q8BSM7 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc43a1Q8BSM7 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc43a1Q8BSM7 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Slc43a1Q8BSM7 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc43a1Q8BSM7 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Slc43a1Q8BSM7 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Slc43a1Q8BSM7 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slc43a1Q8BSM7 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Slc43a1Q8BSM7 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.27■□□□□ 0.36
Slc43a1Q8BSM7 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Slc43a1Q8BSM7 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.27■□□□□ 0.36
Slc43a1Q8BSM7 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.27■□□□□ 0.36
Slc43a1Q8BSM7 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Slc43a1Q8BSM7 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms