Protein–RNA interactions for Protein: Q8BRN9

Cc2d1b, Coiled-coil and C2 domain-containing protein 1B, mousemouse

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cc2d1bQ8BRN9 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Cc2d1bQ8BRN9 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Cc2d1bQ8BRN9 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cc2d1bQ8BRN9 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cc2d1bQ8BRN9 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19■□□□□ 0.63
Cc2d1bQ8BRN9 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19■□□□□ 0.63
Cc2d1bQ8BRN9 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19■□□□□ 0.63
Cc2d1bQ8BRN9 Gm5643-201ENSMUST00000117081 966 ntBASIC19■□□□□ 0.63
Cc2d1bQ8BRN9 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19■□□□□ 0.63
Cc2d1bQ8BRN9 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19■□□□□ 0.63
Cc2d1bQ8BRN9 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cc2d1bQ8BRN9 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cc2d1bQ8BRN9 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Cc2d1bQ8BRN9 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cc2d1bQ8BRN9 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cc2d1bQ8BRN9 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cc2d1bQ8BRN9 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cc2d1bQ8BRN9 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cc2d1bQ8BRN9 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cc2d1bQ8BRN9 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
Cc2d1bQ8BRN9 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.99■□□□□ 0.63
Cc2d1bQ8BRN9 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cc2d1bQ8BRN9 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.99■□□□□ 0.63
Cc2d1bQ8BRN9 Gm10653-202ENSMUST00000139570 835 ntBASIC18.99■□□□□ 0.63
Cc2d1bQ8BRN9 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.99■□□□□ 0.63
Cc2d1bQ8BRN9 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cc2d1bQ8BRN9 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Cc2d1bQ8BRN9 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cc2d1bQ8BRN9 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cc2d1bQ8BRN9 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cc2d1bQ8BRN9 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cc2d1bQ8BRN9 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.99■□□□□ 0.63
Cc2d1bQ8BRN9 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cc2d1bQ8BRN9 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cc2d1bQ8BRN9 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cc2d1bQ8BRN9 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
Cc2d1bQ8BRN9 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cc2d1bQ8BRN9 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cc2d1bQ8BRN9 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cc2d1bQ8BRN9 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cc2d1bQ8BRN9 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cc2d1bQ8BRN9 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.98■□□□□ 0.63
Cc2d1bQ8BRN9 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cc2d1bQ8BRN9 Gm43183-201ENSMUST00000200632 547 ntBASIC18.98■□□□□ 0.63
Cc2d1bQ8BRN9 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cc2d1bQ8BRN9 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cc2d1bQ8BRN9 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cc2d1bQ8BRN9 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cc2d1bQ8BRN9 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cc2d1bQ8BRN9 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Cc2d1bQ8BRN9 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cc2d1bQ8BRN9 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cc2d1bQ8BRN9 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.98■□□□□ 0.63
Cc2d1bQ8BRN9 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cc2d1bQ8BRN9 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cc2d1bQ8BRN9 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cc2d1bQ8BRN9 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cc2d1bQ8BRN9 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Cc2d1bQ8BRN9 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cc2d1bQ8BRN9 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cc2d1bQ8BRN9 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cc2d1bQ8BRN9 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
Cc2d1bQ8BRN9 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Cc2d1bQ8BRN9 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Cc2d1bQ8BRN9 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cc2d1bQ8BRN9 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cc2d1bQ8BRN9 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cc2d1bQ8BRN9 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cc2d1bQ8BRN9 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cc2d1bQ8BRN9 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cc2d1bQ8BRN9 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cc2d1bQ8BRN9 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cc2d1bQ8BRN9 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cc2d1bQ8BRN9 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.96■□□□□ 0.63
Cc2d1bQ8BRN9 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cc2d1bQ8BRN9 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cc2d1bQ8BRN9 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.96■□□□□ 0.63
Cc2d1bQ8BRN9 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cc2d1bQ8BRN9 Gm4974-201ENSMUST00000209974 875 ntBASIC18.96■□□□□ 0.63
Cc2d1bQ8BRN9 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.96■□□□□ 0.63
Cc2d1bQ8BRN9 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Cc2d1bQ8BRN9 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cc2d1bQ8BRN9 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cc2d1bQ8BRN9 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Cc2d1bQ8BRN9 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cc2d1bQ8BRN9 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cc2d1bQ8BRN9 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cc2d1bQ8BRN9 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cc2d1bQ8BRN9 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cc2d1bQ8BRN9 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cc2d1bQ8BRN9 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cc2d1bQ8BRN9 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cc2d1bQ8BRN9 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cc2d1bQ8BRN9 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cc2d1bQ8BRN9 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cc2d1bQ8BRN9 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cc2d1bQ8BRN9 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cc2d1bQ8BRN9 Gm10517-202ENSMUST00000192970 758 ntBASIC18.95■□□□□ 0.62
Cc2d1bQ8BRN9 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cc2d1bQ8BRN9 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms